Luteibacter pinisoli: FIV34_08775
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Entry
FIV34_08775 CDS
T06035
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
lpy
Luteibacter pinisoli
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpy03016
]
FIV34_08775 (rnd)
Enzymes [BR:
lpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
FIV34_08775 (rnd)
Transfer RNA biogenesis [BR:
lpy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FIV34_08775 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDE39285
UniProt:
A0A4Y5Z438
LinkDB
All DBs
Position
complement(1916944..1918065)
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AA seq
373 aa
AA seq
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MSSSELAPAAPWIDHRDDLAAWLAPIGPTAVVGLDTEFMRRNTFYPQLALLQLAHEGRYA
LIDPLGDTLGDTLQPVFAAQPVVTVMHSAGEDLEAMAPFLPDGPHTLFDTQIAAAFVGMG
LGISYRALVADLVGAELDKGETRSDWLQRPLTESQKLYATLDVVHLHPVHAILTERLAER
GREAWHAEDCARMKRRASQREGDPQPQRGFKPAADWPRERQALLRRILRWRETTARTLDK
PRSWLLEDAHALDLAGSLPKDLAALEALARGTRALRAAQREELFEVVRRPVEASEVEATA
SVLGHPAGEAKRVINEMRSAIDTLATHLDLPPGLLCSRRSMEEYVMGGGEWPEALEGWRR
EVLFDRLSALLPG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgagcgaactcgcgcccgccgccccgtggatcgaccatcgggacgacctggcc
gcctggctggcgccgatcggcccaacggcggtggtcggcctcgacaccgagttcatgcgc
cgcaacaccttctatccgcagctcgcgctcctgcagctggcacatgaaggccgttacgcg
ctgatcgatccgctgggcgatacgctgggcgatacgttacagccggtgttcgcggcgcag
cccgtcgtcaccgtgatgcacagcgccggcgaagacctcgaagcgatggcgccgttcctg
cctgacggcccgcacacgttgtttgatacgcagatcgcggcggcgttcgtcggcatgggc
ctcggcatcagttaccgcgccctggtggccgacctcgttggtgccgaactggacaagggc
gaaacgcgcagcgactggctgcagcgtccgctcaccgaatcgcagaagctctacgccacg
ctggacgtggtgcaccttcacccggtccacgccatccttaccgagcgcctcgccgaacgc
gggcgcgaggcatggcatgccgaggactgcgcacgcatgaagcgccgtgccagccagcgt
gagggcgacccgcagccgcagcgtggcttcaagcccgcggcagactggccgcgcgagcgc
caggccctgctccgccgcatcctgcgctggcgcgaaaccacggcccgcacgctggacaag
ccgcgttcgtggttgctggaagatgcccacgcgctcgacctggccggcagccttcccaag
gatctcgccgcactcgaagccctcgcccgcggcacgcgcgccctgcgcgccgcccagcgc
gaggagctgttcgaggtggtccgccgcccggtcgaagcgtccgaggtggaagccacggcc
tcggtgcttggccaccccgccggcgaagccaagcgcgtgatcaacgaaatgcgcagcgcc
atcgacaccctggccacccacctcgacctcccgcccggcctgctctgctcgcgccggagc
atggaggaatacgtgatgggtggcggcgaatggcccgaagccctcgaaggctggcgccgc
gaagtcctcttcgaccgcctctcggccctgctgccggggtaa
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