Luteibacter pinisoli: FIV34_11155
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Entry
FIV34_11155 CDS
T06035
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
lpy
Luteibacter pinisoli
Pathway
lpy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FIV34_11155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpy03400
]
FIV34_11155
DNA repair and recombination proteins [BR:
lpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIV34_11155
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FIV34_11155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
SMC_N
nSTAND1
DnaJ_CXXCXGXG
AAA_25
AAA_29
AAA_16
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QDE39721
UniProt:
A0A4Y5Z368
LinkDB
All DBs
Position
2460107..2462758
Genome browser
AA seq
883 aa
AA seq
DB search
MKKTPPNRPTATPDHCVSVRGAREHNLKNVDVVIPRDALVVFSGISGSGKSSLAFGTLYA
EAQRRYLESVAPYARRLIDQVGVPDVDDIEGLPPAVALQQQRGTPGARSSVGSVTTLSSL
VRMLYSRAGSYPANQPMLFAEDFSPNTPQGACPHCHGLGHVYEVTEQSMVPDPSLSIRER
AIASWPPAWHGQNLRDILVTLGYDVDIPWRDLPKKQREWILFTEEQPVAPVYTGFTPAET
RAALKRKTEPSYMGTYMGARRYVLHTFATTQSALMKKRVSRYMIGSVCPVCHGKRLKKES
LSVTFAGLDIGALSALSFDDMADVLMPVAEGRFDDGSASGRKGTRSRADGKKDMARRVAE
GGLSHEGSSDVRRTPNLSEEKRIAAQRIAQDLLARLATLRNLGLGYLSMDRASPTLSPGE
LQRLRLATQIRSNLFGVVYVLDEPSAGLHPADGEALMSALVQLKEAGNSIFVVEHDLDMM
RRADWLVDVGPDAGERGGQVLYSGPPAGLKAVKASHTARYLFGHDRIDVREPRKPNGLLA
LRGITRNNLDHLDVDFPLGVFTAVTGVSGSGKSSLVSQALVELLGEHLGQDLAALPEETD
EPGPGVVIRTGGRIQSGADAIKRLVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATKSA
KAKKFDAGRFSFNLPKGRCDTCEGEGFVSVELLFMPSVFAPCPTCHGARYNEATLKVQWN
EKNIAEVLRLTVEEACAFFADEPAILKPLQLLRDIGLGYLRLGQPATELSGGEAQRIKLA
TELQRPQRGSTLYVLDEPTTGLHPADVDKLVAQLQGLVDAGNTVIVIEHEMRVVAGSDWV
IDVGPGAGGNGGRIVASGPPREVATAAGSVTAKYLARVLGVDL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacgcccccgaaccgccccacggccaccccggaccactgtgtcagcgtccgc
ggcgcgcgcgaacacaacctcaagaacgtggatgtcgtcattccgcgagacgccctggtg
gtgttttcgggcatttccggctccgggaagtcatcgctcgccttcggcacgctgtatgcc
gaggcccagcgccgctacctcgagtccgtggccccgtacgcccggcgcctgatcgaccag
gtgggcgtgccggatgtcgacgatatcgagggcctgccgcccgcggtggccctgcagcag
cagcgcggcacccccggtgcgcgctcgtcggtgggcagcgtcaccaccctttccagcctc
gtacgcatgctctactcgcgcgccggcagctatcccgcgaaccagcccatgctgttcgcc
gaggacttctccccgaacacgccgcaaggcgcctgcccgcactgccatggcctcgggcac
gtgtacgaggtcaccgagcagtcgatggtgccggacccctcgctgagcatccgcgagcgc
gccatcgcgtcgtggccgcccgcctggcacgggcagaacctgcgcgacatcctcgtcacc
ctcggctacgacgtggacatcccctggcgtgacctgccgaagaagcagcgcgagtggatc
ctcttcacggaggagcagccggtggcgccggtgtataccgggttcacgccggccgagaca
cgtgcggcgctgaagcgcaagacggagcccagctacatgggtacctacatgggcgcgcgc
cgctatgtgctgcacaccttcgcgacgacgcaaagcgcgttgatgaaaaagcgcgtctcg
cgttacatgatcggcagcgtatgcccggtctgccacggcaagcgactgaagaaggagtcg
ctctccgtgacgtttgccgggctcgatattggcgcgttgtcggcgttgtcgttcgacgac
atggcggatgtgctgatgccggtggcggaaggacgcttcgacgacggttcggcgagcggc
cgcaagggcacgcggtcacgtgccgacggcaagaaggacatggcgcgccgcgtggcggaa
ggcggcttgtcgcatgaaggttcttccgacgtccggcgcacgccaaacctttcggaagag
aagcgcatcgctgcccagcgcatcgcccaagacctcctggcgcggctggccaccttgcgt
aacctcggcctgggttacttgtcgatggatcgggccagcccgacgctgtcaccgggtgaa
ctgcagcgcttgcgcctggccacgcagattcgttccaacctcttcggcgtcgtgtacgtg
ctcgatgaaccctcggcaggattgcaccccgctgatggtgaagcgctcatgtccgcgctc
gtccagctcaaggaagcaggcaactcgatcttcgtggtcgagcacgatctcgacatgatg
cggcgcgctgattggctggtcgatgtcggccctgacgccggcgagcgcggtggccaggtg
ctttacagcggcccgcctgccggcttgaaggcggtcaaggcctcccacacggcgcgctac
ctgtttgggcacgatcgcattgacgttcgcgagccgcgcaaacccaatggcttactggcg
ttgcgcggcatcacccgaaacaacctggaccacctcgacgtcgattttccgctcggcgta
ttcaccgccgtcaccggcgtgtccggctcggggaaatcgagcctggtgagccaggcgctg
gttgagctgctcggcgagcaccttgggcaggaccttgccgcgctccccgaagagacggac
gagcccggcccgggcgtcgtcatccggaccggcggccgcatccagtccggtgcggacgcc
atcaagcgcctggtccaggtcgaccagaagccgatcgggcgtacacctcgctccaacctc
gcgacgtataccggcctgttcgaccacgtccgcaagctctttgccgcaacaaaaagcgcg
aaggcgaagaaatttgatgcaggccgcttctccttcaacctgcccaagggccgttgcgac
acctgcgaaggcgaaggcttcgtcagtgtcgaactgctgttcatgcccagcgtcttcgcc
ccctgccccacctgccacggcgcccgctacaacgaggccaccctgaaggtgcagtggaac
gaaaagaacatcgccgaggtgcttcgtcttaccgtcgaggaagcctgcgcgttcttcgcc
gatgaaccggccatcctgaagccgctacagctgctccgcgatatcggcctgggctatctc
cggctcggccagccggccaccgaactctccggtggcgaagcccagcgcatcaagctggcc
accgaactgcaacgcccgcaacgcggaagcacgctgtacgtactcgacgaaccgaccacc
gggctgcatccggcggatgtcgacaagctcgtcgcccagctgcagggtctcgtcgatgcc
ggcaatacggtgatcgtcatcgagcacgagatgcgcgtggtcgcgggtagcgactgggtg
atcgatgtcggcccgggcgcgggtggcaacggcgggcgcatcgtggcaagcgggccgccg
cgcgaggtcgcaacggcggccgggagcgtgactgcgaaatatctggcacgagtgctcggc
gtcgacctgtaa
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