Luteibacter pinisoli: FIV34_12425
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Entry
FIV34_12425 CDS
T06035
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
lpy
Luteibacter pinisoli
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpy03019
]
FIV34_12425
03009 Ribosome biogenesis [BR:
lpy03009
]
FIV34_12425
Messenger RNA biogenesis [BR:
lpy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FIV34_12425
Ribosome biogenesis [BR:
lpy03009
]
Eukaryotic type
Pre-60S particles
RNases
FIV34_12425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF1380
Motif
Other DBs
NCBI-ProteinID:
QDE39960
UniProt:
A0A4Y5Z3I6
LinkDB
All DBs
Position
complement(2737298..2737864)
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AA seq
188 aa
AA seq
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MTPAHDDNLIWIDLEMTGLDTDNDSILEIATVVTDKDLNVLAEGPVFAISHADARLQQMD
AWNRNQHMRSGLWGRAVESDATPEEAEAATIAFLQKWVPAGKSPMCGNSICQDRRFMHRE
MPKLERYFHYRNLDVSTLKELSRRWSPEIAKGFAKDSAHTALSDIRDSIDELRYYRRFLG
PLAGPNPG
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagcgcacgacgacaacctcatctggattgacctggaaatgaccgggttggac
acggataacgattccatcctggagatcgccaccgtggtgacggacaaggatctgaacgtg
cttgccgaagggccggtgttcgccatcagccacgcggatgcgcgcctgcagcagatggac
gcgtggaaccgcaaccagcacatgcgctcgggcctgtggggccgcgcggtggagtcggat
gccacgccggaagaggccgaggccgccaccatcgccttcctgcagaagtgggtgcccgcg
ggcaagtcgccgatgtgcggcaactccatctgccaggaccgccgcttcatgcatcgcgag
atgccgaagctggagcgctatttccactaccgcaacctcgacgtgtcgacgctgaaagag
ctgtcgcgccgctggtcgccggagatcgccaagggcttcgcgaaggattcggcgcacacc
gcgctgtccgacatccgcgactccatcgacgagctgcgctactaccgccgtttcctcggc
cccctggccggcccgaacccgggctga
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