Luteibacter pinisoli: FIV34_13820
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Entry
FIV34_13820 CDS
T06035
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lpy
Luteibacter pinisoli
Brite
KEGG Orthology (KO) [BR:
lpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpy03016
]
FIV34_13820 (truD)
Enzymes [BR:
lpy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FIV34_13820 (truD)
Transfer RNA biogenesis [BR:
lpy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FIV34_13820 (truD)
Prokaryotic type
FIV34_13820 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QDE40205
UniProt:
A0A4Y5Z7A3
LinkDB
All DBs
Position
complement(3041957..3042973)
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AA seq
338 aa
AA seq
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MSEYELPFAFGAPPLRARLRAQPEDFFVEEILGYEPDGAGEHAFVLVEKRGQNTDWVARE
VAKFAGIAPMNVGYAGMKDRHAVTRQVFTVQLPGKADPDWAAFPHADVTLTALGRHSRKI
KRGALRGNRFVLVLRDVEGERAEAEGRLAAIAARGVPNYFGEQRFGLGGNNVEQARAMFK
GRRVDRDKRSILLSAARSHIFNGVLAERVASGTWDSAMDGEIWGLDGSRSWFGPEAFNDT
LAERLGRFDIHPTGPLWGSGDTPAGGEVAALENRIAERDGDLAAGLIGARMDQERRALRL
KPADFAWRWLDDGALEVTFSLPAGAYATTVVREIAVTG
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtacgaactgcccttcgccttcggcgccccgccgctgcgcgcacgcctgcga
gcccagcctgaggatttcttcgtggaagagatcctcggttacgagcccgatggcgcgggc
gagcacgcgttcgtgctggtggaaaagcgtggccagaacaccgactgggtggcccgtgaa
gtcgcgaagttcgccggcatcgcgccgatgaacgtgggctacgcaggcatgaaggaccgc
cacgcggtcacccgtcaggtcttcaccgtgcagctgcccggcaaggcggacccggactgg
gcggcgtttccgcacgcggacgtgacgctcacggcgctggggcggcattcgcgcaagatc
aagcgcggcgccttgcgcggtaatcgtttcgtgctggtgctgcgcgacgtcgaaggcgag
cgtgcggaagccgagggtcgcctggcggcgatcgcggcgcgcggcgtgcccaattatttc
ggcgagcagcgcttcggtctcggtggcaacaacgtcgagcaggcccgcgccatgttcaag
ggccggcgcgtggatcgcgacaagcgctccatcctgctctccgcggcgcgctcgcacatc
ttcaatggcgtcctggccgaacgcgtggcgtccggcacgtgggattcggcgatggacggc
gagatctggggcctggacggctcgcgctcgtggttcggcccggaggccttcaacgacacg
ctcgccgagcgcctgggccggttcgacatccacccgaccggtccgctgtggggcagtggc
gacacgcccgcgggtggcgaggtcgctgcgctcgagaaccgcatcgccgaacgggatggc
gacctggccgccggccttattggcgcgcggatggatcaggagcgccgggcgcttcgtctc
aaaccggctgatttcgcctggcgctggctcgacgacggtgcgttggaagtgacgttctcg
ctaccggccggcgcgtacgccaccacggtcgtccgcgagatcgcggtgacggggtaa
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