Lactiplantibacillus plantarum 16: Lp16_0498
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Entry
Lp16_0498 CDS
T02698
Name
(GenBank) transcription accessory protein, contains S1 RNA binding domain
KO
K06959
protein Tex
Organism
lpz
Lactiplantibacillus plantarum 16
Brite
KEGG Orthology (KO) [BR:
lpz00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Lp16_0498
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
SBP_bac_5
Rab5-bind
Motif
Other DBs
NCBI-ProteinID:
AGO07196
LinkDB
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Position
537806..539989
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AA seq
727 aa
AA seq
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MGEIMDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREI
KDNYDRLASLESRKADVMKLIAEQDHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKAT
IAKDAGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALAGAHEILAEAFGDNAGL
RNWVRNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKV
LKVSIDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAA
NEQAIKVFGDNLYHLLMQAPLKGRVVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPA
PTAKREAAAGEFKTFLEKYHVEMIAIGNGTASRESEEFVAQVLKTMTRPVYYVIVNEAGA
SVYSASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELT
TQLDTVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVP
RLGPKAYEQAVGFLRIIDGKNVFDNTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQ
LDLAQLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDVLKMSDLKPGMQLQGTV
RNVVDFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEAVDEQRQRIALT
MIAPAEA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ttgggtgaaataatggataatcagattttaacgttagttaatcaaacgctgacgaagttt
aaaccgcaacagatcaaagcggttctcggactcatggacgaaggtaacaccgttccgttt
atcgcacggtatcgaaaggaacgtaccggtaacttagatgaagttgaaattcgcgaaatt
aaagataactatgatcggcttgcgagtctagagagtcgtaaggcagatgtgatgaagttg
atcgctgaacaagatcacttgacgccggctttaaagcaagccattgaaaaagctgacaag
ttgcaagatgtcgaagatttgtacttaccgtacaaacagaagcgacgtacgaaggcaacg
attgcgaaagatgctggactggagccgttagcagcttggttattacgttttccggcaagt
ggtattcaggaacacgcggcgcagtttgtgaacgaagcgcaggacatcacagacgcgaat
accgcgttagctggagctcacgaaatcttggctgaggcctttggtgataatgccggttta
cgaaactgggtccggaattatacgcgtgaccggggcttactagtcgcaaaagtgaaaccc
aagggtaaagcagccgatgaacaaggtgtttaccaacagtattatgattttaatagtccc
atcaagcagatggtaccgtaccgggtactggctatcaaccgtggggaagccgaaaaagta
ttgaaagtcagcattgatgttgatcgtgctggaattgaccggtattgtcattttcgcttt
attggtcagcaccacggcccagcgattgaactagtagaagctgcttatcaggatgcctac
aaacgctttattggcccagccatcgaacgtgaacttcgcaatgaattgagtgcggctgcc
aatgaacaggccatcaaagtctttggcgataatttgtaccacttattaatgcaggcacca
ttaaaaggtcgcgtggtattagggttcgaccctgcttaccggacggggtgtaaattagcc
gtgatggacgcgaatggtaagttcttagataagctcgtgatttatccacacaaaccagct
ccaactgccaaacgggaagctgctgcgggtgagtttaaaacctttttggagaagtatcat
gttgaaatgattgcgattggtaacgggacggcttcccgcgaatccgaggagtttgtggca
caggtattgaagactatgacccgaccggtttattatgtcatcgtgaacgaagccggggct
tccgtgtactctgctagtgctaaggcgcgcgccgaatttcctgagctacacgttgaacaa
cgtagtgcgattagtatcggccggcgactacaagacccactggcagaattgatcaaaatc
gatccgaagtcagtgggagtggggcaataccaacacgatgtgccccagaaggaattgaca
acgcagctagatacggtgattgagaccgcggttaaccaagttggggtcaatttgaatacc
gctagttcggagctattgacgcatatttcggggctatccagcacgattgcccaaaatgtg
attacttatcgggatgaaaatggcgaattcacgagccgaccacaattgaaaaaagtgccg
cggttgggaccgaaagcttatgaacaagcggtcggcttcctgcgaatcattgacggcaag
aatgtttttgataacacggatattcatccagaaagttatcccgcagccaaagcgttattg
gcagcggctggattgaagacgacggacgttgggacgactaaagcccaacagttgaatcaa
ttagatttagcgcaacttgcgaccagcaccggtgtcggtgaactgaccttaaaggatatt
attagtagtttgcaaaagcccgggcgtgatgttcgtgatacgatgcccgcaccgttactc
cggcaagacgttttaaagatgagtgatctaaaaccagggatgcagttgcaaggaaccgta
cgcaacgtggtcgactttggggcgtttgtggatattggtgtcaagcaagatggcctcgta
catgtctccaaactaacggataagttcttgaaagatccgcgtcaggcggtggcagttggc
gacatcgtaacggtgtgggtcgaagcagttgatgaacagcggcagcgcatcgctttgacg
atgattgcaccggctgaagcataa
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