Lactiplantibacillus plantarum 16: Lp16_0507
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Entry
Lp16_0507 CDS
T02698
Name
(GenBank) sigma54 activator, mannose PTS operon regulator
Organism
lpz
Lactiplantibacillus plantarum 16
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
EIIA-man
Sigma54_activ_2
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_2
AAA_14
AAA_16
NACHT
RuvB_N
TrmB
AAA_29
AAA_7
AAA_15
DEAD
ABC_tran
FtsK_SpoIIIE
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AGO07205
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Position
547776..550625
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AA seq
949 aa
AA seq
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MTRKSKICEYVRQHSDRHGLTTEMVATALMIARSNVSKELNALVREGQLHKLTGRPVHYV
PVNTTATTATTTSGVANGATTERIPTAPVATSVPKPVVNDIFASMIGSHESLANQVEQAK
AAILYPPRGLNTLIIGPTGSGKTYFANAMYRFAETQQVLTNPQGLITFNCADYAHNPELL
MSHLFGYVKGSFTGANEDKDGLIQEADGGMLFLDEVHRLPPEGQEMIFYFMDHGTYSRLG
ETAKSHHANVHLVCATTEDPESTLLQTFVRRIPITIQLPAFNHRSAKERLELLKALLSLE
ANRINKQIRLTEDVVQALLGSVTFGNVGQLKSNIQLVCAQGFVNSIENDSEITITMDDLP
QNIRSGLMTVASNRHELGAISELLDPVLIVKPNDGPTPLRNKNDNYELPYNLYEIIGDKA
ALLRREGLDKEHINRFITTDINVHLKSFYKQNQLEVSPENKLAEIVDQDVIDFTKTAQMT
VQDMLGYNFKDNFIYAVSLHVSSFIKRIQAGKPMRQMSSDMLAMVREYPAEIKAAEALKQ
GLEERYHLPIPKSEVYYLAILLISLKSMQLNGKVGVLVAAHGMSTASSMAQVVGQLLDDY
DVQAFDMPLDMDPSVAYDHVKRRVEKLDSGKGILLLVDMGSLTTFGERIQQETGIATRTI
DMVTTPVVLEAVRKASLVDSDLDSMYQELVGFKGYSRISRNLPTDSQRATVKPALATDKT
AQRAIIAICATGVGTAERIKSILDSLLAQNFIEGITVFPISVVEMKTRIQQISQNYQIIA
ATGITKPELDVPFISLEELLQGGGEKFIDQLATGIDSPQTMAEESQQLTPELCERYLGDY
FTFLNPKKLTGILWEYSEVIATHLDGVMTNAFRIDLIMHLAGALERTAIKDEISAPTEEM
PDIMASKWYPLVQQANQQLTDQLQLTFSDAENYYIVQLLETHQAKVAMS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
ttgaccagaaaatccaagatttgtgaatacgtccgtcaacatagcgatcgacacggactg
acgacggaaatggtagcgaccgctttaatgatagcgcgttcaaacgtcagcaaggaatta
aatgcactggtacgagaaggccagctgcacaagctgacagggcggcctgtgcactatgtt
ccggtgaatacgacagccacaacggccacaacaactagtggcgtagcgaatggggcgacg
acagagcgaataccgacagcgcccgtcgcgacgtctgtgcctaaaccggttgtaaatgat
atatttgccagcatgattggttcgcatgagagccttgctaatcaagtggaacaggcgaaa
gcggccattctttacccaccgcggggattgaatacattaatcattggcccgactggttct
ggtaaaacttactttgcaaacgccatgtatcgttttgcggaaacccaacaagtcttaacg
aacccgcaaggcctgattacattcaattgtgccgattatgcgcataatccggaattattg
atgtcgcatttgtttggttatgttaaggggtcttttacaggtgctaatgaagataaggac
ggtttgatccaagaagcggatgggggcatgttgttcctagatgaagtgcaccgtctacca
ccagaaggtcaggaaatgattttttatttcatggatcacgggacttattcacgactcggt
gagacggcgaagagtcaccatgccaatgtccacttagtctgtgcaacgaccgaggaccca
gaaagtaccctactgcagacctttgttcggcgaattccgattacgattcagctaccagcg
ttcaatcatcgctcagccaaggaacgtttagaattactgaaggcattattgtcattggaa
gctaatcgaatcaataaacagattcggttaacggaggacgtggtgcaggccttacttggc
tcagtcacatttgggaacgtcggtcagttgaagtcgaacattcagctggtgtgtgcccag
ggttttgtcaatagcatcgaaaatgacagtgaaatcacaatcacgatggatgatttgcca
cagaatatccgtagcggtctcatgacagtagcctctaaccgtcacgaactgggggccatc
tctgagttgttggacccggttctcatcgtgaagccaaatgatggtccaacaccgcttcgt
aataagaacgataattatgaattaccatataatttatatgagattattggtgataaagca
gcgttactccgacgagaaggccttgataaagaacacatcaatcgtttcatcacgaccgat
atcaatgtgcatttgaaatcattttataaacaaaatcagttagaagtttcaccagaaaac
aagttagccgagatcgttgatcaggacgttattgattttaccaagacggcacagatgacg
gttcaagatatgctgggttataacttcaaggataactttatttacgctgtgagcttgcat
gtcagttcctttatcaaacgcatccaggcaggcaagcccatgcgtcaaatgagttcggat
atgttagcgatggtgcgtgaatatccggctgaaatcaaagcagcggaggcgctcaagcaa
ggattagaggaacggtatcatttaccgattcccaagtccgaagtttattatctggccatt
ttgctcatctcgttaaaatcgatgcagcttaacggcaaagttggcgtgttggtggcagcg
cacgggatgagtaccgcgtcttccatggcacaggtcgtcggacaattgttagatgattat
gatgttcaggctttcgacatgcctctcgatatggacccgagtgtcgcctatgatcatgtc
aagcgacgagtagaaaagcttgattctgggaaaggaattttgttactagtcgatatgggg
tcgttaacgaccttcggggaacgaattcagcaggagacaggaattgcgacgcgaacgatt
gacatggtgaccacgccggttgttttggaagccgttcggaaggctagcctggtcgatagt
gatctggattctatgtatcaggagctcgttggtttcaaaggttattcgcgaatttcacgg
aacctaccaacggatagtcagcgcgcaacagtcaagcccgccttagcgacggataagacg
gcacaacgggcgattattgcaatttgtgcgaccggcgttgggacggctgaacgtatcaag
tcaattttagacagtttattagctcaaaactttatcgaaggtattacggtattcccaatc
tcagtggtcgaaatgaagacacggatacaacaaatcagtcaaaattatcaaatcattgcg
gcaactgggattacaaaacccgaattagacgtcccttttatttcattggaagaattgcta
caaggtggtggcgaaaagtttattgaccagttagcgacgggtatcgattcgccacagacc
atggcggaagaaagtcagcagttgacaccggaactctgcgaacggtacttaggcgattac
ttcacgtttttaaatcctaagaagttaacgggaattttatgggagtatagcgaagtgatt
gcgacgcacttggatggtgtaatgacgaatgcttttcgcattgatttgattatgcactta
gcgggtgcgctagaacgaacggccatcaaagatgaaatttcggcacccaccgaagagatg
ccagacattatggcatcgaagtggtacccacttgtgcaacaggccaatcagcaattgaca
gatcaactacagttaaccttctcagatgctgaaaattattatattgtgcaattattggag
actcatcaggcaaaggtcgcgatgagttga
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