Lactiplantibacillus plantarum 16: Lp16_0555
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Entry
Lp16_0555 CDS
T02698
Name
(GenBank) DNA-directed DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lpz
Lactiplantibacillus plantarum 16
Pathway
lpz03030
DNA replication
lpz03430
Mismatch repair
lpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lp16_0555
03430 Mismatch repair
Lp16_0555
03440 Homologous recombination
Lp16_0555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpz03032
]
Lp16_0555
03400 DNA repair and recombination proteins [BR:
lpz03400
]
Lp16_0555
Enzymes [BR:
lpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lp16_0555
DNA replication proteins [BR:
lpz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lp16_0555
DNA repair and recombination proteins [BR:
lpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lp16_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
UPF0154
AAA
Ig_ILCR1
Motif
Other DBs
NCBI-ProteinID:
AGO07253
LinkDB
All DBs
Position
595134..596153
Genome browser
AA seq
339 aa
AA seq
DB search
MATTESFAQTLAAKQPRLLAAFKHIIAQNHLAHAYLFAGMEGAGQPELAHWIAQRLFCLH
INDGEPDGTCEECVRIANGSHPDIVTVAPEGQRIHVDQVRYLKAEFSKSAVEGNRKLFII
NDAEKMTASAANSLLKFIEEPSGNVTALLLTTNKQLMLPTIISRTQVIEFPPLNAQALQQ
TFEQAGIAPNQAQMLRGLTNSVTQAQALLADDWLPQAAQALWRWFDQAVKGDPRSFVAVQ
VNLVGLAKDADHQLVMLDLIAALFQDLLQLHFEVATTALTFGQYQKELAGLTAEVSDEQL
IAATELALTAKRQLASNISFQNVLEGLTLKLWPIFQTNA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaccgagtcatttgcgcaaacgttagcggcgaaacagccccgcttattagcg
gcatttaaacacatcatcgcccagaaccatctggcccacgcgtacttattcgcggggatg
gaaggcgctggacaaccagaactggcccattggattgcgcaacggttgttctgcctgcat
attaatgatggtgaaccagatggcacttgtgaggagtgcgtccggattgctaatgggtcg
caccctgatattgtgacagtggctcccgagggtcagcgaattcacgttgatcaggttcgt
tacttaaaagctgaattctctaagagtgcggtcgaaggtaaccggaaactgttcatcatt
aatgatgcggagaagatgacagcgagtgctgccaatagcttattgaagtttattgaggag
ccaagtggtaacgtcacggccttgttattaacgactaataagcaactgatgctaccaacg
attatttcacgaacccaggtgatcgaattcccaccattaaatgcgcaggcgttacagcag
acgtttgaacaggccgggattgcgccaaaccaagcgcagatgttacggggcctgacaaat
agcgtgacccaggcgcaggcgttgctagcggatgattggttaccacaagctgcgcaagca
ttgtggcggtggtttgaccaggctgttaagggtgatccacggagttttgtggctgtgcag
gtcaatttagttggtttggctaaggacgctgatcatcagctggttatgttggatttaatt
gcggccttgttccaagatctattgcaattacattttgaggtggcaacgacagcgttaacc
tttggtcagtaccaaaaagaattggccgggttaacggctgaagtcagcgatgagcagttg
attgcggcgacagaactagctttaacggccaagcgccagctagctagcaatattagtttt
caaaatgtcttagaaggcttaacgttaaagttatggccgatttttcaaacaaacgcttaa
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