Lactiplantibacillus plantarum 16: Lp16_0724
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Entry
Lp16_0724 CDS
T02698
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpz
Lactiplantibacillus plantarum 16
Pathway
lpz03420
Nucleotide excision repair
lpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Lp16_0724
03430 Mismatch repair
Lp16_0724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpz03400
]
Lp16_0724
Enzymes [BR:
lpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lp16_0724
DNA repair and recombination proteins [BR:
lpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lp16_0724
MMR (mismatch excision repair)
Other MMR factors
Lp16_0724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_16
AAA_30
SLFN-g3_helicase
DEAD
TMV_coat
NACHT
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
AGO07421
LinkDB
All DBs
Position
784404..786710
Genome browser
AA seq
768 aa
AA seq
DB search
MAKSIKAAEQEHLDHVVAKIKVAEEQQSQTITRSEKDQADIKRDLLNNINIKTDSYEGMM
ETGLSVRQQQQMMDERQNSWKHATKQLSTLKKLEKNAYFARIDFHETGEPKPETIYIGLS
SFSDTPDHFLIYDWRAPISSIYYDGGLGHVTYQTPDGEQTVNVKLKRQLMVENGQIVTVY
DTDEAVGDSMLLEVLDEKSDVKMKSIVTTIQKEQNTIIRDTSSDLLFVQGAAGSGKTSSV
LQRVAYLLYRYRGNLTAGQVILFSPNQLFNDYINQVLPELGEQNMVQMTYFQYASYRLPH
MQVETLQQRFETENTPQMAKITKLEGSLAFFNAVTTYGRHLEQADMRFRNITLNDEVIIS
REKIKSIYYSFNENYHLANRLSATKEELIKILNRKVESEMRSKWVEEAVQDLSREEINQL
YGNQPREFKNGDKEFKFLARKIVMQRLGKARTQIVRNRFLSINMQYAHFLREVPKIIKLA
DHGISAADWDATVERKLAEIKERHISLTTVSAYMYLHDLMTGKHGQRDIRFVFLDEIQDY
NAFQLAFLKFSFPQARFTMLGDLNQAIFTKENSHSLINELATLFDPEKTRVVQLTKSYRS
TQQITDFTKEILVNGEAVTAFDRQGDLPNVVVTPNFEAGVDQVVDQLAMNDSERDTTAII
GKSLAECEALTKALKARGEQVTLIQTENQRLAPGVIVVPSFLAKGLEFDAVIVWNANQEN
YQREDERQLLYTICSRAMHELTLVAVGSLSPLLARVNHALYTLNEAKV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctaagtcaattaaagctgcagaacaggaacacttagatcatgtggttgcgaaaatt
aaggtggctgaagagcaacaaagccaaaccattacgcgctcggaaaaagatcaggccgat
attaaacgtgacttgctgaataacatcaatataaaaacggatagttacgaaggcatgatg
gagaccggattatccgtgcggcagcaacaacagatgatggatgagcggcagaatagttgg
aagcacgcgactaagcaattatcgacgttaaaaaagttggaaaagaatgcttattttgcg
cggatcgattttcatgagactggtgagcctaagcctgagacgatttatatcggactcagt
tcattttctgacacgccggatcactttttgatctacgactggcgagcgcctatttccagt
atttattatgacggtgggttagggcacgtgacgtaccagactccggatggtgaacagacc
gttaatgtgaagttgaagcggcagttgatggttgagaatggccagatcgtgacagtctac
gatactgatgaagccgttggtgactcgatgttactagaagtgttggatgaaaagtccgat
gtgaagatgaagagtatcgtgacgacgattcaaaaggaacaaaataccattattcgggat
acgagttctgacctcctgtttgtgcagggggcggccggttccgggaagacctcgtccgtt
ttacaacgggtcgcatacttgttgtatcgttaccggggtaatttgacggccggacaagtc
atcttgttctcaccaaatcaactctttaatgattatattaaccaagtattgcccgaactg
ggtgaacaaaacatggttcagatgacttatttccaatacgcatcgtaccggttaccacac
atgcaagttgaaactttacagcagcggtttgaaactgaaaatacaccgcagatggcaaag
attacgaagttggaaggtagcctcgcatttttcaacgcggttacaacgtatggccgacat
ttggaacaagcggacatgcgtttccgtaacattacgttgaacgatgaagtgattatttcc
cgggaaaagattaaatcgatttactactctttcaacgaaaactaccacttagcgaaccgg
ttatcagcaactaaggaagaattaatcaagattttgaatcgcaaggttgaatcggagatg
cgttccaagtgggtcgaagaagcggttcaagacttatcacgcgaagagatcaatcaatta
tatggcaatcagccgcgggaatttaagaatggcgataaagagtttaaattcttagcacgt
aaaattgtgatgcaacgcttaggaaaagcccggacgcaaatcgtgcgtaaccgtttcttg
agcatcaacatgcagtacgcgcatttcttacgcgaagtaccgaagatcatcaagttggct
gatcacggtatctcagctgctgactgggatgctacggttgaacggaaactagccgagatt
aaggaacgtcatatctcgttaacaacggtctcagcttacatgtacctgcatgacttaatg
accggaaagcacgggcagcgtgacatccggtttgtcttcttggatgagattcaagattac
aacgcctttcagctagcgttcctgaagtttagcttccctcaagcccgcttcacaatgctc
ggtgacttgaaccaggcgatttttaccaaggaaaacagccattcgctgatcaatgaattg
gccacattatttgaccctgaaaagacgcgggtcgtgcaattgactaaatcgtaccggtca
acgcaacagattactgatttcaccaaggaaattttagtcaatggtgaagccgtcacggct
tttgatcgtcagggcgacttgccaaatgtcgttgtgacgcctaactttgaagcaggggtt
gatcaagtcgttgatcagctagcgatgaacgattctgaacgtgatacgacggcaattatc
gggaaatccttagcagaatgcgaggcgctcacgaaggccctgaaagctcgtggtgagcag
gtcacgttgattcaaactgaaaatcaacgcttggctcctggtgtcattgtagtcccgtct
ttcttagcaaaagggttggagtttgacgcggtcatcgtgtggaacgctaatcaggaaaat
taccaacgtgaagatgaacggcaactattatatacaatctgttcacgggccatgcacgag
ctaacgctagtcgcggtgggtagcttgtcaccgttactagcgcgggtgaaccacgccttg
tatacattaaatgaagcaaaagtttaa
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integrated database retrieval system
