Lactiplantibacillus plantarum 16: Lp16_1470
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Entry
Lp16_1470 CDS
T02698
Name
(GenBank) DNA-directed DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lpz
Lactiplantibacillus plantarum 16
Pathway
lpz03030
DNA replication
lpz03430
Mismatch repair
lpz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lp16_1470
03430 Mismatch repair
Lp16_1470
03440 Homologous recombination
Lp16_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpz03032
]
Lp16_1470
03400 DNA repair and recombination proteins [BR:
lpz03400
]
Lp16_1470
Enzymes [BR:
lpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lp16_1470
DNA replication proteins [BR:
lpz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lp16_1470
DNA repair and recombination proteins [BR:
lpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lp16_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGO08156
LinkDB
All DBs
Position
complement(1584590..1587940)
Genome browser
AA seq
1116 aa
AA seq
DB search
MAQYVPLQVLSTFSLLHSTSTVSELVQTAKQQGYSTLALTDVDIMYGIVDFYNACRQAEI
TPILGITLNLLGRELTAQTFSLVVLAKDQAGYQNLMRLSTMKQTATDAGLSLTAVLPYLN
HLMVLTPAKDSELAALLLQNTAERAADWITTLRQAVDSASLYLGISLDQAPALRTTMTAF
AQQHQLPVVALDPVDYVQAKDYFAVSVLRAIDRGQQIEQPESLQGIEGSHYLRPANTVTA
DYEQLGLTTAVAATAEIAAQCQVELQFQQPQLPQFPTPAGQPANVYLRQLCTAGLTERLA
AITPSVDQQAYQDRLDHELTVIDQMGFDDYFLIVWDVMNFAHEAQITTGPGRGSAAGSLV
AYALNITDVDPLKYDLLFERFLNAKRANMPDIDLDIPDNRREQVLNYVHDKYGHDRVAQI
ITFGTLAAKQALRDVGRVFGLSTYEMSDWSAAIPNQLHITLDQAYQGSQRLQNLVADSSK
NKLLFETARRLEGLPRHYSTHAAGVVLSQKPLIQIVPLQAGSETMMMTQYTKDTVEAVGL
LKMDFLGLRNLSLMASALHYVQRQTGRPLAITKIDLNDPATLKLFQAGDTTGVFQFESAG
IRNVLRRLHPDNFELVAAVNALYRPGPMENIDHFIARKQGQEPVSYPAEQLAPILGPTYG
ILVYQEQVMQVAAVMGGFTLGEADLLRRAMSKKKRAVIDKMRQQFIAGAQQNGYSEAVAT
QVYQYIEQFANYGFNRSHAIAYSKMAFELAYLKVHYSGAFFTSLMNSVLGNGTKLKQYLA
EARQHQVAIIPPDINRSGQYFDWNGQAIVFGLSSIKGLRRDFIASVLDERQANGPFKSLQ
QFMQRIDAKWLKADLMDALIYAGAFDHFGLNRAELLTSVPELMSSAELAGGSMSLFESLA
PKIKKQPELSLGERLAKEAEYLGVYVSGHPVETYDWLAQQRHTQLVSTLTSEQPAQILVY
ITKVRTIRTKRGQPMAFATGSDLSGEIDLTIFPNTYQRIQAELKPEAIVLITGKVEQQRD
LQVIVNTWQLAEQLPKPTGQLFLRLQPEQATATVQKEILRILSQYRGPNPVLIYSVAAHR
TVELNSQYWVAENPDLVGALTTLLGRDNVVMKNAIP
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaatatgttccattgcaagtattgagtacttttagtttacttcacagcactagt
acagttagtgagctagtccaaactgccaagcaacaggggtattccacgttggctttaaca
gacgttgatatcatgtacggtattgttgatttttataatgcctgtcgccaggcagaaatt
accccgatattgggaataacattgaacttattaggacgtgaactaacggcgcaaacgttt
agtctggtcgtgcttgcgaaagatcaagctggctatcaaaacttgatgcggttgtcgacg
atgaagcagacggcgacggatgcaggattgtcgctaacagccgtattaccttatttgaac
catttaatggtcttaaccccggctaaagacagtgaactagctgcgctgttgttacaaaac
accgctgagcgagctgctgattggattaccacgctgaggcaggcggtcgactctgctagc
ctttacttagggatttctttggatcaggcccctgcattgcgaacaacaatgacggccttt
gcgcaacagcatcaattgccggtagttgcgttagatccagtcgactatgtccaagcaaag
gattactttgccgtttcagttttgcgagcaatcgatcggggccaacagatcgaacagccc
gaatcgttacaaggtatcgaaggcagtcactacttacggccggccaacaccgtaacggct
gactatgagcaactgggattgacgacggcggtggcggctacggccgaaattgcggcacag
tgtcaagttgaattacaatttcaacagccacagttgccgcaatttccaacgcccgctgga
caaccagcgaatgtttatttacggcagttatgcacggctggtctaacggagcgattggcg
gcaataacgccgtcggttgatcagcaggcttaccaggaccgtttggatcacgaactgacc
gtgatcgatcagatgggctttgatgattactttttgatcgtgtgggatgtcatgaatttt
gcgcatgaggcccagattacaactggacctgggcgaggttctgcagcaggctcattagtt
gcttatgcactcaatattacggatgtcgatcccttaaaatatgacttgctatttgaacgt
ttcttgaacgctaaacgggcgaatatgccagatattgacttggatattccagataatcgc
cgtgaacaggtacttaattatgttcatgataagtatggtcatgaccgcgtcgcacaaatc
attacgtttgggaccttggcagcaaagcaagcattgcgcgatgttggccgtgtgtttggc
ctctcaacttacgagatgagtgactggagtgccgcaatcccaaaccaattgcatattaca
cttgaccaggcctaccagggctcacaacggttacaaaacctcgttgctgattcatctaaa
aataaattattatttgaaacagctcgccgtttggaagggttgccacgacattattcaaca
cacgcggccggggtggtattaagccaaaaaccattaattcagatcgtaccactacaagca
ggtagtgaaactatgatgatgacccagtatactaaggacactgttgaagcggttggtttg
ttaaagatggatttcttaggattacggaatttgtctttgatggcaagtgcgctacattat
gtgcagcgtcaaactggcaggccactggctattactaaaatcgatttgaacgatccagcg
accctgaaattatttcaggcgggcgacacgaccggagtcttccaatttgaatcggcggga
attcgaaacgtgttacggcgtctgcacccggataactttgaattggtcgccgcggtcaat
gcactttaccggccggggcccatggaaaatatcgaccattttattgcccgcaaacaaggc
caagaaccggtcagttatccggcggaacaacttgcgcccatcttaggaccaacgtacggt
attctggtctatcaagaacaagtcatgcaagtcgccgcggtcatgggcggttttacacta
ggtgaagccgacttattgcggcgggcgatgagcaagaaaaaacgtgctgtgattgataaa
atgcggcaacaatttatcgctggtgcacaacagaatggttattccgaagcagttgcgaca
caggtttatcaatatattgaacaatttgcgaactatggtttcaaccgctcacacgcgatt
gcctacagtaagatggcttttgaacttgcttacttgaaagtccattattccggagcgttc
tttacctcattgatgaattctgtgttgggcaatggaacgaagctgaaacagtatctagcg
gaagctcgtcagcaccaagtggcgattattcccccggatattaatcggagcggtcaatac
tttgattggaatggtcaagccattgtgtttggactcagctcaatcaaagggttgcgccgt
gactttattgcgagtgtgttagacgagcggcaggcgaacggaccgtttaaaagtcttcag
cagttcatgcaacggattgacgcgaagtggctcaaagccgatttgatggatgcactgatc
tatgcgggggcttttgaccactttggtttgaaccgtgcagagctactgaccagtgtgcct
gaattgatgtcaagtgccgagttagccggtggcagtatgagtttatttgaatcattagcc
cctaagatcaaaaaacagccggagctttcgttaggtgagcgattggccaaagaagcggag
tatcttggtgtgtacgtttcagggcaccctgtggaaacgtatgattggctcgcgcaacaa
cgacatacgcaattagtcagcacgctcacgagtgaacaaccggcacaaatactggtctat
attactaaggtccgaacgattcggaccaaacgtggtcaaccaatggcatttgcaacggga
agtgatttgtccggcgaaattgacttgacgatttttcccaacacctatcaacggattcag
gcggaattgaaaccagaagcaatcgtgttaattactggtaaggtcgagcaacagcgggat
ttgcaagtgatcgtaaacacctggcagttggcggaacaattacccaaaccaaccggccaa
ctctttttgcggttgcaacctgagcaagcaacggcgactgtgcaaaaggaaattttaagg
atcttaagtcaatatcgaggtcctaatccagttctaatttactcggtagcagcacatcga
acggttgaactaaattcacagtattgggtcgcagaaaatccagatttggttggagcgctt
acaaccttattaggtcgcgataatgtggtgatgaagaacgctatcccttga
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integrated database retrieval system
