Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1237
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Entry
LRHK_1237 CDS
T01961
Name
(GenBank) S1 RNA binding domain protein
KO
K06959
protein Tex
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
LRHK_1237
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
TOBE_2
Motif
Other DBs
NCBI-ProteinID:
AER64023
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Position
1170675..1172852
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AA seq
725 aa
AA seq
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MIEDQTIQIVQQDLTGMTSRQISTVLNLMNEGNTVPFIARYRKEMTGSLDEVQIQAIEEA
YKRVTALQDRKAAVIKSIAEQGALTPELEQQIHASTKLQDVEDIYLPYKQKRQTKATIAK
ARGLEPFAQWILSFPVGDLTSEAAKFVNPDKEVATEQDVLDGAHEILAEKFSEMAPIRNW
VRNFTMRTGTIKTTVKTKGKELDEKGVYQQFYDFEETVKKMSSTRTLAINRGEKEKILTV
KVQVDPASVMQYCHFKLIDNRPSTEATAFIEAAYQDAYKRFIGPAIEREVRNTLTESAEE
QSIKVFGQNLYNLLMQAPIKGKVVLGFDPAYRTGCKLAVVDENGKFLDKAVIYPHKPAPE
KKRQAAASELIALLEKYHVTMIAIGNGTASRESEQFVAETLKQIKRDIYYVIVNEAGASV
YSASQEARDEFPDLHVEQRSAISIARRLQDPLAELVKIDPESIGVGQYQHDLPAKALASE
VDAVVERAVNQVGVNLNTASYQLLTHISGLSKTIATNIVKYRDENGRYNSRAELKKVPRL
GPKSFEQSVGFLRIIGGKQPLDNTDIHPESYPVAKKILAAAGLSTADLGDHEAVAKVASV
DGAPFVNDGVGVETVNDIISSLQNPGRDLRDNMAAPLLRQDVLTMEDLKPGMKLEGTVRN
VVDFGAFVDIGVKHDGLVHVSKMTRKFVRDPKTVVAVGDIVTVWIESVDLNRERIQLTMI
APTVG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
ttgattgaagaccaaaccattcaaatcgtacaacaagacttgacgggaatgacgagtcgg
caaatcagtacggttttgaatttgatgaatgagggcaatacggttccgtttattgcgcgg
tatcgtaaagaaatgaccgggagtctggatgaagttcagattcaggcgattgaggaagcc
tataaacgggtgacggcgctgcaggatcgtaaagctgcggtgatcaagagtattgccgaa
caaggggcgctgacacctgagctggagcagcaaatccatgctagtaccaagttgcaggat
gttgaggatatttatttaccttataagcaaaagcgtcagaccaaggcaaccattgctaaa
gcgcgcggacttgaaccttttgcgcagtggattctttctttcccagtaggcgatttgacg
tctgaagcggctaaatttgtgaatccggacaaagaggttgcgactgagcaggacgtattg
gacggtgcccatgaaattcttgcggagaagtttagcgaaatggcgccgatccgcaattgg
gtgcgcaatttcaccatgcgtactggtacgattaaaacgaccgtcaaaaccaaaggcaag
gaactggacgaaaaaggcgtttatcagcaattttacgactttgaagagaccgtcaagaaa
atgtcatcgactcggacgctggccattaatcgcggcgaaaaagagaagattttgacagtt
aaggttcaagttgatcctgcttcggtgatgcaatattgccattttaaattgattgataat
cgcccgagtaccgaagcaacagcgtttattgaagcggcgtatcaggatgcctacaaacgc
ttcattggcccggcgattgaacgggaagtgcgcaatactttaaccgaaagtgctgaggag
cagtcgattaaggtctttggtcagaatctgtacaacttgctgatgcaggcaccgattaaa
ggcaaggtggttctcggatttgatccagcttatcgcaccggctgcaaactagccgtggtg
gacgaaaatggtaagtttttggacaaagctgtcatttatccgcacaaaccggcgccagag
aagaagcgtcaggccgcggcttcggaactgatcgcgctactcgaaaagtatcatgtgacg
atgattgcgatcggcaacggcacagcaagtcgggaatcggaacaatttgtggcggaaacg
cttaagcagatcaagcgggatatttattatgtcatcgtcaacgaagccggcgcatcggta
tattcagccagtcaagaggcgcgggatgagtttccggacctgcatgtcgaacagcgcagc
gcaatcagcattgctcgccgcctgcaggatccactggcggaattagtgaagattgatccg
gaatcgattggtgtggggcagtatcagcacgatttacccgccaaggcgctggcaagtgaa
gtcgatgcagtcgtggaacgcgcggtcaatcaggttggcgttaacctgaacacagctagt
taccaactgttaacccacatttccgggttgtcgaaaacgattgcgactaatattgtgaaa
taccgcgatgaaaatggccgctataacagccgtgccgaattgaaaaaagtaccacggctg
ggaccgaaatcatttgaacagtcagttggttttctgcgaatcatcggcggtaagcagcca
cttgataacaccgatattcacccggaaagttaccccgttgccaaaaagattctggctgcg
gcggggttatccacggctgatttaggtgatcatgaggcggttgccaaggttgctagtgtt
gatggtgcgccatttgtcaatgatggcgttggcgttgagacagtgaatgacatcattagc
agtctgcaaaatcccggtcgcgatcttcgtgacaacatggcagcaccgcttcttcggcaa
gatgtccttaccatggaagacctgaagccgggcatgaagctggaaggaactgtccgcaat
gtcgtggatttcggcgcgtttgtggacattggcgttaagcacgatggtttagtccatgtc
tctaaaatgacccgcaagtttgtccgcgatcctaaaacggttgtggcagtcggtgatatt
gtgacggtctggattgaatcggtggatctcaatcgcgagcggatacagctgacgatgatc
gcgccgactgttggttaa
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