Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1274
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Entry
LRHK_1274 CDS
T01961
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra00470
D-Amino acid metabolism
lra00550
Peptidoglycan biosynthesis
lra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRHK_1274 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRHK_1274 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lra01011
]
LRHK_1274 (murD)
Enzymes [BR:
lra01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LRHK_1274 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lra01011
]
Precursor biosynthesis
Amino acid ligase
LRHK_1274 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
AlaDh_PNT_C
2-Hacid_dh_C
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AER64059
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All DBs
Position
1213556..1214935
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AA seq
459 aa
AA seq
DB search
MKNISDYRNKKVLVLGLAKSGVNAARLLHKLGALVTVNDKKQFDDNKEAQELLADGMRVI
TGRHPVELLDEHFELMVKNPGIPYSNPMVQRAQELGLPIITEPELAFQVSEAEWIGITGT
NGKTTTTTLIGLMLNQQWPHHAFDAGNIGIPVSQVAQKAGKDDTIVAELSSFQLCGIKTL
HPHIAVLTNIYEAHLDWHGNRANYVAAKMRITMNQTPDDYFIMNWDLPEMHQLAKQSQAQ
IVPFSRKQAAGARASLIDGWLTFDGDKIMPASDLQIPGLHNIENALAAIAAAKLKGVSDD
AIREVLRTFSGVKHRIQYLETINGRRVYNDSKATNVEAATVALNAFQQPIVWLAGGLDRG
LPMDALTPLVKKHVKSMVVFGQTAPLMAKIAKEAGVPVQKTENVMTAVPLAYEASRPGDV
ILLSPAAASWDQYPNFEVRGDDFIKAVHSLQQNLESEGH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacatttcggattatcgtaataaaaaggtgcttgtattaggactggcaaaaagc
ggcgtcaatgcagcgcgcttactacataaattaggggctttggtaaccgtcaatgataag
aagcaattcgatgacaacaaagaggctcaggagttgttggcagacgggatgcgcgtgatt
accgggcgccatccagttgaattgttagatgagcattttgagttgatggtcaaaaatccg
ggtattccatacagcaatccgatggttcagcgcgcgcaagaattgggcctgccgattatt
actgagccggagctagcttttcaggtatccgaagcagagtggatcggcattaccgggacg
aatggcaagacaacgacgaccacgctgatcgggttaatgttgaaccaacagtggcctcac
cacgcctttgatgccgggaatatcggcattccggtcagtcaggtggctcaaaaagcaggt
aaagatgacaccattgttgctgagctatcgagttttcagctctgcggcattaagacattg
catccccatatcgcagtattaacgaacatctatgaggctcatttggactggcatggcaac
cgcgctaattacgttgcggcgaaaatgcgcattacgatgaatcaaacgccggatgattac
tttatcatgaactgggatcttcccgaaatgcaccagttagcaaagcaaagtcaagcccag
attgtcccattttcccgcaaacaggctgctggtgcacgggcttcgttaattgatggctgg
ttgacgtttgatggtgacaagattatgcctgccagtgacctgcagattccggggttgcac
aatatcgaaaacgccttggctgccattgccgcggccaaactgaagggtgtgagtgatgac
gcaattcgtgaggtactgcggactttttctggcgtcaaacaccgaattcaatatttggaa
acgatcaatgggcgtcgggtatacaatgactccaaggcaaccaatgtcgaggcggcaact
gtagccttgaatgcattccagcagccaattgtttggttggcaggcgggcttgatcgtggt
ttgccgatggacgctttaaccccgctcgttaagaaacacgtcaaaagcatggtcgtattc
ggtcaaaccgcgccattaatggcaaaaattgctaaagaagccggcgtcccggttcaaaaa
accgagaatgttatgacggcggttccattggcctatgaagccagccgccccggcgatgtg
attttgctctcgccagcagcagcaagttgggatcagtatcctaactttgaagtgcgcggc
gatgatttcatcaaggctgttcatagcctacagcaaaatcttgaaagcgagggtcattaa
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