Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1329
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Entry
LRHK_1329 CDS
T01961
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03030
DNA replication
lra03430
Mismatch repair
lra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRHK_1329 (holA)
03430 Mismatch repair
LRHK_1329 (holA)
03440 Homologous recombination
LRHK_1329 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lra03032
]
LRHK_1329 (holA)
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_1329 (holA)
Enzymes [BR:
lra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRHK_1329 (holA)
DNA replication proteins [BR:
lra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRHK_1329 (holA)
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRHK_1329 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Spb1_C
Motif
Other DBs
NCBI-ProteinID:
AER64112
LinkDB
All DBs
Position
1269401..1270462
Genome browser
AA seq
353 aa
AA seq
DB search
MQVRDFIKHLKNGERPPLTLILGEEQALRQQAQQALANLIPEDQKAMNFGRYDMHQTPVG
VALDDATSIPFFGEYREVVIDDPYFLTGEKSTDKIEHDLTGLQAYFDNPVPSTMMVLIAP
YKKLDERKRLTKALKKAALIVDAAPLDERSARMALAQIFKQHQVDIQPPALDALVQRTNG
QYSVMMGEVRKLLTYASDGSPLTVAAVSALVPKQLNDRVFDLVTDVLRQNAADALALYRD
LLAQREEPIRLNALMLGQFRLLIQVKLLAQKGYGQGDIAATLKAHPYRVKLALRQVGRLP
YHQLAQAYSGLVDTETAMKTGTIDKALAFELFMLKYTGQASAHRKGKYTASRS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtccgtgattttatcaaacatctgaaaaatggcgaacgaccgccgctgacatta
attcttggcgaggagcaggctttacggcaacaggctcaacaagcgctggctaatttgatt
cctgaagaccaaaaagccatgaattttggccgttatgacatgcatcaaactccagtgggc
gttgccttggatgatgcgacttcaattccttttttcggcgaataccgcgaagttgtgatt
gacgatccttactttttaaccggcgaaaaaagtaccgataagattgaacatgatctcacc
ggactgcaggcttattttgacaatccggttccgtcaacgatgatggtgttaatcgcacca
tataaaaaacttgatgaacgtaaacggctgacgaaagctttgaagaaggcagctttgatt
gttgatgctgcgccactggatgaacggtcagcgcgaatggcattggcacaaatcttcaag
caacatcaagtcgatattcagccaccagcactcgatgcgcttgttcagcgaacgaacgga
cagtattcggtcatgatgggcgaagtccggaaacttctgacgtatgcaagtgatggtagt
ccattaactgttgctgcggtatcggcattggtccccaagcagcttaatgaccgggttttt
gatctggtaacggatgtgttgcgtcaaaatgctgcggatgctttggcactttatcgtgat
ctgcttgcacaacgcgaagaaccgattcggctcaatgcgttaatgctaggccaatttcga
cttttaattcaggttaagttattagcgcaaaaaggttacggccaaggtgatattgccgct
acgctcaaggcccatccgtaccgagtcaaattagcattacggcaggttggtcgtttgcct
tatcaccaactggcccaggcttatagtgggctggtggatactgaaaccgcgatgaagacg
ggaacgattgataaggcactggcctttgaactgttcatgctgaagtacacaggtcaagcg
tcagcgcatcggaaggggaagtatacggcttcacgctcctaa
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