Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1356
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Entry
LRHK_1356 CDS
T01961
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lra03016
]
LRHK_1356 (rnz)
Enzymes [BR:
lra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LRHK_1356 (rnz)
Transfer RNA biogenesis [BR:
lra03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LRHK_1356 (rnz)
Prokaryotic type
LRHK_1356 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AER64139
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All DBs
Position
1297854..1298813
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AA seq
319 aa
AA seq
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MEIQFLGTGAGSPSKVRNVSSLALKLLDERNEVWLFDVGEGTQHQILQTTIKPRKIAKVF
ITHLHGDHIFGLPGFLASRANQGGTEPLTIYGPPGIEDFVKTSLKVSQSHLSYAIKFVLL
RHPGVIFDDQTFKVSFDRLDHRITSFGFRVEEKPHPGELLIDKVRAAKIPAGPVYASLKA
GKTVTLPDGRTFDGHDFIGSAQPGRTVAIFGDTRMCRRALPLAAGADVLVHESTFGPDES
QLAKQYYHSTNLQAAELAKRAGVGRLLLNHISARYLGPSVAMLEKSARHIFPQTHVVRDL
EEINIPFASPQLQPTVSAK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcaatttttggggacaggcgcaggttcaccttccaaagtccgcaatgttagc
agtttggcgctcaagctgcttgatgagcgcaatgaggtttggttgtttgatgtgggcgaa
ggaactcagcatcaaatcttacagaccacgatcaaaccgaggaaaattgccaaagtattt
attacccatttgcatggtgatcatatttttggcttaccgggctttttagctagtcgggca
aatcaaggcggcactgaaccgttaacgatttatggacctccggggattgaggactttgtt
aagacaagtttgaaggtttctcagagtcatttgagttatgcaattaaatttgtgttgtta
cgacatccaggcgtgatttttgacgatcagaccttcaaagtcagttttgatcgacttgat
catcggattaccagttttggatttcgggttgaagaaaaaccacacccgggcgagttactg
attgataaggtccgtgccgccaagattccggctggaccggtttatgcttcgttgaaagca
ggcaaaaccgtcacattgccggatggtcggacttttgatggtcatgacttcatcggatca
gcacaaccgggtcggacagtggccatttttggcgatacgcgtatgtgtcgtcgggcctta
ccattagcagccggggcagatgtcttggttcatgaaagtacgtttggtccggatgaaagt
caactggccaagcagtattatcacagtacgaatcttcaggcagccgagttggcgaaacga
gctggcgttggtcggctgttgttaaatcatatttcagcacgctatcttggccctagtgtg
gcaatgttagaaaaaagtgcacggcatattttcccgcaaacgcatgttgtcagagatttg
gaggaaattaacattccatttgcaagtccgcaactgcaaccgactgtttccgctaaatga
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