Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1499
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Entry
LRHK_1499 CDS
T01961
Name
(GenBank) PD-(D/E)XK nuclease superfamily protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_1499
Enzymes [BR:
lra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRHK_1499
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LRHK_1499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AER64274
LinkDB
All DBs
Position
complement(1443684..1447223)
Genome browser
AA seq
1179 aa
AA seq
DB search
MGLQFILGDATTDHTQTMAAMIHEKLTADSQNRIFLLVPNHIKFEAEIDLLKRLRQLQQG
NSETYVQSRVQVLSFSRLAWFYLKNTPLYQQPRLDQASNTMLVAKILAERQADLTIYAGE
AQHTGFVTQLAGQLSELMIGRITAEDLANTVAALTPGDRHRAKLRDLGIILDQYEAEIGP
YATTASLLSGLQQAMRTHDLTHTFIYLNHFNVFSASESALVETMLETAAEVTIGLVLDRP
YPTAPPVAPNLFLPAGRLYHRLYQKAKTMRIPIRLDRFAQPRHLSLGMRQVASWWQANTN
IEPQPAPTANVADHVHLATATDPYQELRHVAQSIYQAVRNGARYRDFVIIARRLDPYATI
IPAIFAEFQIPQFTDLQRPMKDHPLVVLIESLFAIQDHDYQYQDIMRLLHTELLLPQGMA
VADFRDAVDTLDNHLVRTGIAGKRRWTQTEPWRYFQRNPAADETEMDPEADKTAQINAIK
TLVAQTVPALLKQWQAAKTGLEAARSLYHWLTKIGVVDQLNAWREAASAAGELARSRAHE
QAWTTFTALLDDYVTILGNAKFNREQFHELLAAGFASATYTQIPATLDAVVISETGLVRL
AKAKHVFVIGATSTAMPDVPNDDGVLNSEERQLLAAQLPDDRFLPEQGPTTTLGDPFINY
LGFMAASETLTLSYPMQNPQENSENQASPYFQQLKRALHLVPETWAPVTLATTVKSVLGS
PRAMLSDFIRAAGDAQQQKQPLSLAWQSVLSALKQTDLANLAQRLAGSLTYQNDPGRLDP
QLAVQLYGRDMNVSVSRLETYYLNHFEYFLKYGLLLQPRPEFELSPADTGSLFHAVLDRY
LTQLRDQQQNLADVEPAAIMAAVPPMVAEIAKQPGYEILGSTYRMTYLTKRLSRLLIQVL
LNMRQQQQRSGFRPVRTELQFGRIGDTKGLPGLSWPLPHGGRVNVHGKIDRLDIYREPDA
RRFIIVDYKSGQRRFDDSDAYYGIALQMLTYIEAMTNVTAEPPFVPAGALYFHLQDPKLK
YTPELEPALERLKAFKYLGFLVAEHGDELAAVDRTISPESGGRSEIAPLGFKKDGSFNQN
QSNVLTPEALRAYLAHNQALIIDAATQILAGDIALEPFQYGQSSTIVSRSDYQSIMLFDP
ATGFDHYHHVPKLKRKDVIGRLTADPTQIPHSEKEHPQS
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggttgcagtttattctcggtgatgcaacgacggatcatacccaaaccatggcggct
atgattcatgaaaagcttaccgctgattcccaaaaccggatttttttactggtaccgaac
catattaaatttgaagcagaaattgatcttctcaaacgcttgcgccaattgcaacagggg
aactcggagacttacgtgcaaagtcgcgttcaggtcttatccttttcccggctggcctgg
ttttatttgaagaacacgccgctttatcagcaaccacggctggatcaagctagcaatacg
atgctggttgccaaaattcttgcagaacggcaagcggacttaaccatttatgccggagaa
gctcagcacactgggtttgtcacacagcttgctggccaattgagtgaactcatgattggc
cggattaccgccgaagacttagccaataccgttgcggctctgacaccaggcgatcggcac
cgggctaagttgcgtgatttaggcattattcttgatcaatatgaagcagaaatcggtcct
tatgcgacaaccgccagtctgctaagtgggctgcagcaagccatgcgtacccatgatctc
acccacacgtttatctatctcaaccattttaacgtattttctgcttcagagtcagcactg
gtggaaacgatgctggaaaccgccgcagaagtgacgatcggcctcgtgttggatcggcct
tatccaactgcaccgcctgtggctcctaatctctttttacctgctggtcggctttatcat
cgtttgtatcaaaaagccaaaacgatgcgaattccaattcggttggatcggtttgctcag
ccacggcacttaagcttgggcatgcgacaggtggcgagttggtggcaggctaataccaat
atcgaaccgcagccggcgccaaccgcaaatgttgccgatcatgtgcatttagccactgcg
actgatccctatcaggaattgcggcatgtggcccaatctatctatcaagcggttcgcaac
ggagcacgttatcgggattttgtgattattgctcggcgattagatccgtacgcaacgatc
attccggctatttttgctgaatttcagattccacaatttaccgacttgcagcggccgatg
aaggatcatcccttggtggtgttaatcgaaagcctatttgccatccaggatcatgactat
cagtatcaagacatcatgcgcttgttgcatactgagcttttgttgcctcaggggatggcg
gtggcagattttcgtgatgccgtcgataccctcgacaatcatttggttcgaacagggatt
gcaggtaaaagacgctggacacagacagaaccatggcggtattttcagcgtaatcccgct
gctgatgagacagaaatggatcctgaagccgataaaaccgctcaaatcaatgccataaaa
acgctggtggctcaaactgtgccggccttactcaaacaatggcaggcagctaaaaccgga
cttgaggctgcgcgaagtttgtaccactggttaacgaaaattggggtagtggaccagttg
aacgcgtggcgagaagcagcaagtgcagccggtgagcttgctcgcagtcgagcgcacgaa
caagcatggaccacatttaccgctttgctggatgattacgttaccattttgggcaacgct
aagtttaatcgcgagcaatttcatgagttgcttgctgccggctttgccagtgcgacttac
acacagattccggccacacttgacgcggttgtgatttcagaaaccgggttagtccgatta
gccaaagcaaaacatgtttttgttatcggggccaccagcaccgccatgccggatgttccc
aatgatgacggcgttttaaacagtgaagagcgccaattattagctgcacagttgccggat
gaccgctttttacccgagcaaggtccaacaacaactttaggtgatccgtttatcaactat
ttgggcttcatggccgccagcgagacgttgacgctaagttaccccatgcaaaacccgcaa
gaaaatagtgaaaatcaggcgtcaccttattttcagcaactgaaacgggcgcttcatctc
gtgcccgaaacctgggcgccggtaacactcgcgacaacggtcaaatctgtccttggcagc
ccgcgggcaatgttaagcgacttcattcgggctgccggtgatgcccaacagcaaaaacaa
cccctgagtctggcttggcaaagtgtgttaagcgcattgaaacaaaccgatttagccaac
ctggcccaacgccttgccggaagtttgacgtatcaaaatgatcctggccgccttgatcca
cagctggcggtgcaactctatggccgcgatatgaatgtttccgtgtcgcgattggagacg
tattatcttaatcatttcgaatatttccttaaatatggtttgctgctccaaccgcgaccg
gaatttgagctttcaccagccgacaccggtagtctttttcatgctgtacttgatcggtat
ttaacgcaattgcgtgatcaacaacaaaacttggccgatgttgaacccgcggcgatcatg
gctgccgtaccgccaatggttgccgagattgccaaacagccggggtatgaaatcctcggc
agtacgtatcgcatgacttatttgaccaagcgcttaagtcgactgctcattcaggttttg
ctcaacatgcgccagcaacagcaacgcagcggcttccgcccggtgcgcaccgagctgcag
tttggccggattggcgataccaagggactgccaggcttatcatggccgttgccgcatggg
ggtcgcgtcaatgttcacggtaaaatcgatcggcttgatatttatcgcgaacctgatgcc
cggcgttttattattgtcgattataaaagtgggcaacgccgcttcgatgatagtgacgct
tattatggcattgccttgcaaatgctgacttacattgaagcaatgaccaacgtgacagca
gagccaccgtttgttccggcgggggcgctgtattttcacttgcaggatcctaaactcaaa
tacacgcctgaattggaaccggcacttgagcgactcaaagccttcaagtatctggggttc
ttagtcgccgaacacggagatgagctggcggccgtggatcgtaccatttcaccggaaagt
ggcggtcgtagtgagattgcaccgcttggctttaaaaaagatggcagtttcaatcaaaat
cagtcaaacgtcctgactcccgaggcgttgcgggcttatttggctcacaatcaggcgctg
attatcgatgcagccacgcaaattctcgctggggatattgcacttgagcctttccaatat
ggccagtcttccacgattgtcagtcgcagcgactatcaaagtattatgctgtttgaccct
gcaaccggttttgatcattaccatcacgtccctaagttaaagcgtaaagacgtgatcgga
cgccttaccgctgacccgacacaaataccgcattctgaaaaggagcatccacagtcatga
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