Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1512
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Entry
LRHK_1512 CDS
T01961
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor rpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LRHK_1512 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lra03021
]
LRHK_1512 (sigA)
Transcription machinery [BR:
lra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRHK_1512 (sigA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DUF6465
Motif
Other DBs
NCBI-ProteinID:
AER64287
LinkDB
All DBs
Position
complement(1460543..1461793)
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AA seq
416 aa
AA seq
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MADKKTATEVSKTTKKTTAAASTKAATESKAATKKTATKKTTAKKTTASKSHTTTKAYDD
AVKAVIKDYKKKKQITEDDLTSKLIKPFELKSTAIDDLMQKIEDNGIAIVDENGEPATIS
LKKQKKVSKKEMSDMSAPSGVKINDPVRMYLKEIGRVSLLTADEEVALALKIEQGDQEAK
QRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIR
QAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIGAEMDMPTEKVRE
ILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPEDHASYELLKEQLESVLDTLTDREE
NVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaaaacagcaactgaagtaagcaagaccacaaagaagacaacggctgca
gcttcaaccaaagcagcaaccgaatcaaaggctgcgaccaagaagaccgcaaccaagaaa
acaacggccaagaagactaccgctagcaagagtcacacaacgactaaggcttatgatgat
gccgtcaaagctgtcatcaaagattataagaagaaaaagcagatcaccgaagacgattta
acctctaaactgatcaagccatttgagctaaagagtaccgccatcgatgatttaatgcag
aaaatcgaagacaacgggatcgcgattgttgacgaaaacggcgaaccggccacgatcagc
ctcaagaagcaaaaaaaggtttccaagaaggaaatgagcgatatgtccgcgccatccggg
gttaagattaacgacccagtgcggatgtatcttaaggaaatcggccgggtttcattgctg
accgctgatgaagaagttgcccttgctttgaagatcgaacaaggtgatcaagaagccaag
caacgactggccgaagctaacttacgactggtggtttctattgctaagcgctacgttggt
cgtggcatgcagtttctggatttgattcaggaaggtaacatgggcttgatgaaggcggtc
gagaagtttgattaccgcaaaggcttcaagttctccacctacgccacctggtggattcgg
caggcgatcacccgcgcgattgctgaccaagcccggacgattcgaattcctgttcatatg
gttgaaaccattaataaactgattcggattcagcgtcaactgcttcaggatcttggccgc
gaaccaactcctgaagaaatcggtgccgagatggatatgccaaccgaaaaagtccgcgaa
attttgaagatcgcccaagagccagtgtccttggaaacgccaatcggtgaagaggacgat
tcacacctcggcgacttcattgaagaccaagacgctaccagtccagaagatcacgcttcc
tacgaattgctcaaggaacagttggagagcgtgcttgacactttgactgaccgcgaagaa
aatgttttgcggctgcgctttggacttgacgatggccggacccgcacgctggaagaagtc
ggcaaagtctttggcgtgacccgtgaacgcattcgtcagattgaagccaaggcattgcgg
aaactccgccacccgagccgttccaagcagcttaaggattttcttgaataa
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