Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1728
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Entry
LRHK_1728 CDS
T01961
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRHK_1728 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_1728 (mutM)
Enzymes [BR:
lra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LRHK_1728 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LRHK_1728 (mutM)
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRHK_1728 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
BapA_N
Laminin_G_3
RNHCP
Motif
Other DBs
NCBI-ProteinID:
AER64500
LinkDB
All DBs
Position
complement(1677586..1678434)
Genome browser
AA seq
282 aa
AA seq
DB search
MPELPEVETVRRSLLPLVKDKKITAISTNWEKILINGLTAFQKQVVGAAVTTIDRRGKYL
LIRLNNGMTIVSHLRMEGRYYVVSDAKTPLDKHDHVTFTFQDGSQLRYRDLRKFGRMRLI
HTGQEQLVPALAKLGPEPTAATFSENDFAQKLKRHHKAIKSVLLDQTVVAGIGNIYADEV
LWLSKLNPLQPANTLTKAEVHTLHDAIIKELDDAIAAGGTSAHTYVDAEGNRGSFQDALH
VYDREGTPCDRCGTTIVKIKVGQRGTHYCPHCQPLHRRGQLA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaacggttcgccgttccttgttaccgttagtcaaagat
aaaaaaatcaccgcgattagcacaaactgggagaaaatcctcatcaatggtttgacagct
tttcaaaaacaggtcgtgggcgctgccgtcaccacgattgatcgccgcggtaagtattta
ctgattcggcttaacaacggcatgacgattgtcagtcatttgcgcatggaaggccgctat
tacgttgtttcggatgccaaaacgccgctggataagcatgatcatgtgacgtttaccttt
caggatggcagccagttgcgttaccgcgatctgcgcaagtttggccggatgcggctgatt
cacacgggtcaggagcaattggtgccagcgctggccaagctaggaccggagccgactgct
gctacttttagcgaaaatgactttgcccagaaactaaaacggcatcataaagccattaaa
tcggttttgctggatcaaactgttgtggccggaatcggcaatatttatgctgatgaggtc
ttatggctcagcaagctcaatcccctgcagccagctaataccttaaccaaggcggaggtt
cacacgttacatgatgcgattatcaaggaattggacgacgccattgccgctggcgggacc
agtgcccatacttacgttgatgctgaaggcaatcgcggttcgtttcaggatgctttgcat
gtctatgatcgtgaagggacgccttgtgatcgttgcggcaccacgattgtcaaaatcaaa
gtcggtcaacgcggcacgcattattgcccgcattgccagccgctacatcgaagggggcaa
ctggcatga
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