Lacticaseibacillus rhamnosus ATCC 8530: LRHK_1729
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Entry
LRHK_1729 CDS
T01961
Symbol
polA
Name
(GenBank) DNA polymerase I family protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra03030
DNA replication
lra03410
Base excision repair
lra03420
Nucleotide excision repair
lra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRHK_1729 (polA)
03410 Base excision repair
LRHK_1729 (polA)
03420 Nucleotide excision repair
LRHK_1729 (polA)
03440 Homologous recombination
LRHK_1729 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lra03032
]
LRHK_1729 (polA)
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_1729 (polA)
Enzymes [BR:
lra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRHK_1729 (polA)
DNA replication proteins [BR:
lra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LRHK_1729 (polA)
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LRHK_1729 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRHK_1729 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
AER64501
LinkDB
All DBs
Position
complement(1678444..1681089)
Genome browser
AA seq
881 aa
AA seq
DB search
MTSQTKLLLIDGNSIAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKSVKPDAA
LVAFDAGKTTFRTAKYADYKSGRAKTPSELLEQLPYIKELLDDMGIQHYELKDYEADDII
GTMAKRADDAGWQTTIVTGDRDLTQLTTDQTTVQVTVKGVNELEAYTPEHVKEKLGITPT
QIIDLKGLMGDTSDNYPGVTKVGEKTALKLLKQYGSIENLYANIDAMKTSKMKENLINDK
DKAYLSKQLATIDRDAPVTIDLADVKYNGPDLAKLRDFYTKMNMNSLLKKIGGDVAKPSQ
PVHYSVLDDQSILALTKTTEPLTFEIEMLADNYHTAEQVGFFIGTKEETYVSTDVSLLTI
PEVAKWLGDSNRDLTVFDGKRNIVAAHRLGLHLPDIAFDVLLASYLINPDENSNDLGKIA
EDHDYHDLPRDEDVYGKGAKRQVPEDKLLFEQFARKSQALFALRPDLTEDLAKQEQTDLF
TDMEMPLARVLAEMEIQGITLNAQTLKDMGTEFSQSIKVLEEKIYGEAGVKFNLNSPKQL
GEVLFEKLNLPVIKKTKTGYSTSVDVLNELKSASPIVQDILDYRGWAKLNSTYVVGLLKA
QMPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKIIRKAFVPSHPDWQIFSSDYSQ
IELRVLSHISGDENMQQAFKHGVDIHANTAMKIFGLDSPDEVTPDMRRQAKATNFGIVYG
ISDYGLAQNIGISRKQAKAFIDGYFEQYPKVHDYMENMVKKAREDGYVETLFHRRRYLPQ
IHSRNFNLRKFAERTAMNTPIQGSAADIIKVAMIRMQKALDEAHLQAKMLLQVHDELIFE
APTAEMAQLGQLVPKIMDSAVSLAVPLKVESHYGPTWFDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgacgagtcaaactaaattattgttgattgacggcaactcgattgcatttcgtgctttt
tttgccttgtacaatcaactcgatcgtttcaccaatcaagatgggctgcacaccaatgcc
atctacgcatttaacaatatgctcgagattgttttaaagtcggttaaaccggacgctgct
ttggtggcgtttgatgccggaaaaacaacttttcgaacggcaaaatacgcggattataaa
agcggtcgggcgaagacgccaagcgagttgttagagcagctgccgtatatcaaggaacta
ctcgatgatatgggcattcagcattatgaactcaaggattatgaagctgatgacattatc
ggaacgatggctaagcgtgctgatgatgcagggtggcagacaacgattgtgactggcgat
cgtgatttaacccaattaacgacggatcaaacaacggtgcaggtcacggtcaaaggcgtt
aatgaacttgaggcgtacacgccggaacacgttaaagaaaagcttggcattacccccact
cagattattgatctaaaggggttaatgggtgatacgtcagacaattatccaggggtcacc
aaggttggcgaaaaaacggccttaaaactgctaaagcaatacggcagtatcgaaaacctt
tacgctaacattgatgcgatgaagacttccaaaatgaaggaaaatctcatcaatgacaaa
gacaaagcgtacctgagcaagcagttagccacaattgaccgcgatgcacctgtgaccatc
gatcttgcagacgtaaagtataacggtcccgatttggcgaagttacgcgatttctatact
aagatgaatatgaattccttgttgaagaaaattggcggggatgtcgcaaaaccgtcacaa
ccggtacattattccgttttggatgaccaatcaattttggcgctcacgaaaacaaccgaa
ccgttaacctttgagattgaaatgttagcggataattatcataccgctgaacaagtgggc
tttttcatcggaaccaaagaagaaacctatgttagtacagatgtgtcattgttgacgatt
ccggaagttgctaagtggcttggtgattcaaaccgcgacttaacggtgtttgatggtaaa
cgcaatattgtcgccgctcatcgtcttggcttgcatctgcctgacattgccttcgatgtt
ttgttggcctcgtatctgattaatccagatgaaaatagcaatgatctgggtaaaattgca
gaagaccatgattatcatgacttgcctcgcgatgaagatgtatatggtaaaggtgctaag
cgtcaagtgcctgaagataaactgctgtttgaacaattcgctcgtaagtctcaggcctta
ttcgccttgcgtcctgatttaaccgaagatttggctaagcaggaacagacggatcttttc
acggacatggaaatgccactggcgcgggttttggcggaaatggaaattcaaggtatcacg
ttgaatgcccaaaccttaaaggatatgggaaccgaattttcgcaaagcattaaggtgttg
gaagaaaaaatttatggtgaagccggcgttaaatttaatctgaattcgccgaagcaatta
ggcgaagtgttattcgaaaagctgaatttaccagtgattaaaaagaccaaaaccggttat
tccaccagtgtcgatgttttaaacgaattgaaatcggctagtccaattgttcaggatatt
ctggattatcgcggctgggccaaactaaactcgacttatgtggtgggcttgttgaaagca
caaatgccggatcataaaattcacacccgttatttacagacactgacgcaaaccgggcgt
ctgagttccgttgacccgaatatgcaaaatattccagcacgggatgaagggaagattatc
cggaaagcctttgtcccttctcatccggattggcagatttttagctcggattattcgcaa
atcgaattacgcgtgttatcgcatatctcgggtgatgagaatatgcaacaagcctttaaa
cacggcgttgatattcacgcgaataccgccatgaaaatttttggcctcgattctcctgat
gaagtcacgccggatatgcgccgccaagccaaggccacgaactttgggattgtttacggc
atcagcgattatgggttggcgcaaaatatcgggatttccaggaagcaggctaaggcgttt
attgacggttattttgaacagtacccgaaagtccacgattacatggaaaatatggtcaag
aaagcgcgtgaagatggctatgttgaaacgctcttccaccgccgtcgttatctgccccag
attcactcccgcaatttcaacttgcgcaagtttgcggaacgaacggcgatgaatacgccg
atccaagggagtgccgcagatatcattaaagtcgcgatgattcgcatgcaaaaggcgttg
gatgaggcccatctgcaggcgaaaatgttgctgcaggtacacgatgaactgatttttgaa
gctccgactgctgaaatggcgcaacttggacaattagtgcctaagattatggactcggct
gtttcgctggcggtacctttgaaagtcgaaagtcattatggaccgacctggtttgatgcg
aaataa
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