Lacticaseibacillus rhamnosus ATCC 8530: LRHK_2393
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Entry
LRHK_2393 CDS
T01961
Name
(GenBank) putative ABC transporter, ATP-binding protein ComA
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra02010
ABC transporters
lra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRHK_2393
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRHK_2393
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lra01002
]
LRHK_2393
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lra02000
]
LRHK_2393
Peptidases and inhibitors [BR:
lra01002
]
Cysteine peptidases
Family C39
LRHK_2393
Transporters [BR:
lra02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LRHK_2393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
AAA_24
ABC_ATPase
SMC_N
AAA_22
AAA_29
Peptidase_C39_2
AAA_33
AAA_18
NB-ARC
DUF87
Motif
Other DBs
NCBI-ProteinID:
AER65134
LinkDB
All DBs
Position
complement(2351632..2353824)
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AA seq
730 aa
AA seq
DB search
MFKHTPKLGQITYYKRFYTAQVDERDCGVAALNMLLKYNGSDYSLAHLRELAKTNQDGTT
ALGIVRAAEALAFETKPVQADMQLFDLEDVPYPFIAHVLKRGELLHYYVVFKATRTSILI
GDPDPSVRMTWLSREVFEKEWSGVAIFIAPAPQYQPRKEDKGSLFAFVPMLAKQKGIIAN
IILAAVLITVISIVGSYFLQSIIDTYIPNAMRTTMGMIASGLLVAYLLQAVLTYGQNFLM
AVLGQRLAIDVILGYVRHLYELPMSFFSTRRTGEIVSRFADANKIIDALANTIMTLFLDV
WIVLILGIVLGIQNGTLFLVSLIAVPCYLVIVFAFQRPFDRLNQETMESNAILSSSIIED
LNGIETIKSLTGERVSYERVDREFLTYLKRSFSYTKADQLQQAIKGLLKLALNVVVLWIG
ASLVIANRMSLGQMLTFNALLSYFTNPLESIINLQPKLQMARVANNRLNEVYLVESEFKE
QRHLTERHLIEGPIRVRDVSFKYGFGQDVLKNINLEVPENAKYTIVGMSGSGKSTLAKLL
VGFYPVDADKGTITFNGIPVKDINLTTLRQYIEYVPQDPFIFSGTVLENLTLGSRSDVSE
QDLTQACLAAEIAADIANLPQQWQTKLSESGSILSGGQKQRLAIARALLSPAKVLIFDES
TSSLDTITERKIVDRLLAMTDRTIIFVAHRLTIAAKTEQIVVMDHGKIVEQGDHATLLAQ
DGYYARLVHE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacacacccccaaactaggccagatcacctactacaaacgcttctacaccgca
caagttgacgagcgtgactgtggtgtggctgcgttaaacatgctgcttaaatacaatggg
tcggactattcgttagcccacctgcgcgagttagcgaagacaaatcaggatggcacgacg
gctttgggaatcgttcgggccgctgaagcactagcgtttgagacaaaaccggtacaggcg
gatatgcagttgtttgatcttgaggatgtgccttatccgtttattgcccatgtgctgaag
cgcggtgaattgcttcattactatgttgtttttaaagcaacgcgcacgagtattctgatt
ggcgatcctgacccgtcagtgcgcatgacctggctttcgcgagaggtgtttgaaaaagaa
tggtcgggtgtggccatctttattgcaccggcgccgcagtatcagccgcgtaaggaggac
aaaggcagtttgtttgcgtttgtacccatgctggctaagcaaaaaggtattatcgcgaac
attattctggccgcggtattgattacggtcattagtatcgttgggtcgtattttttgcag
tctattattgatacgtatataccgaatgccatgcggacgacgatggggatgattgctagt
ggccttttggtggcttacttgctgcaagctgtgttgacttatggccagaattttttgatg
gcggtgttggggcagcggcttgcgattgatgtcattttagggtatgtgcgccacttatat
gaattgccgatgtcgtttttttcaactcggcggaccggagagattgtgtcgcggtttgcg
gatgccaataaaattattgacgcgctggcgaatacgattatgacgttgtttttggatgtc
tggattgtcctaatattaggcattgttctagggatccaaaatgggactttgtttttagtg
tcattgattgccgtgccgtgttatttggtgattgtttttgcatttcagcggccgtttgat
cggttgaaccaagagacgatggaaagtaacgcaatcttgagttcatcgattattgaagat
ttgaatggcattgaaaccatcaagtccttgaccggcgaacgagttagctatgaacgggtt
gatcgggaatttctaacctatttgaagaggtcgtttagttacaccaaggcagatcagtta
cagcaagcgattaaaggcctgttgaagctggcgttgaacgttgtggtgttgtggattggg
gcaagtttggtgattgccaatcgaatgagtttggggcagatgctgacctttaatgcgctg
ctgtcatactttacgaatccgcttgaaagcatcatcaacctacagccaaagttacaaatg
gcgcgggttgctaacaatcgcctgaatgaagtttatctggtcgaatcggaattcaaagaa
cagcggcacttgacggagcggcatttaatcgaaggtccgatacgcgttcgggatgtctcg
tttaaatatggttttggccaagatgtgttaaaaaacatcaaccttgaagtgccggaaaat
gctaaatataccattgtcggtatgagcggttctggtaagtcgacattagcaaaattatta
gttggcttttacccggttgatgccgataaaggaaccattacgtttaatggcattccggtc
aaagacattaacctgacaacattacggcaatatattgaatatgtacctcaggatccgttt
attttttcgggcacggtgttggagaatttgacgttaggtagccgttcggatgtttcggaa
caagatttgacgcaggcgtgtttggctgcggaaattgccgcagacatcgcaaacttaccg
cagcagtggcagaccaaattgtcagaaagcggcagcattttatcaggcggtcagaagcag
cggctggcgattgcacgggccttgttgtcaccggcaaaagtactgatttttgacgaatcg
accagcagtctggataccattacagagcgaaaaattgtcgatcgcttgctggcaatgacg
gatcggaccattatttttgttgcccatcgcttaactattgcggctaaaaccgaacaaatt
gtggtgatggatcatggcaaaattgtggaacaaggtgaccatgcaacgttgttagcccaa
gacggttattacgcgcgcctggttcatgagtga
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