Lacticaseibacillus rhamnosus ATCC 8530: LRHK_352
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Entry
LRHK_352 CDS
T01961
Name
(GenBank) deoR-like helix-turn-helix domain protein
KO
K03491
probable licABCH operon transcriptional regulator
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lra03000
]
LRHK_352
Transcription factors [BR:
lra03000
]
Prokaryotic type
Other transcription factors
BglG family
LRHK_352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTS_EIIA_2
HTH_11
PRD
Mga
HTH_Mga
HTH_AsnC-type
HTH_DeoR
DNApol3-delta_C
HTH_PafC
HTH_8
HTH_7
HTH_24
TsiV
Xre-like-HTH
HTH_28
HTH_23
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AER63202
LinkDB
All DBs
Position
complement(346625..348418)
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AA seq
597 aa
AA seq
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MREHLIIQALQANGVMSAMALAKAVGVSRRTLQNDLRLLNHAASGFQIRLIRGRGYELQI
TDTKLLAAYLATLAGQAQPKMPAKRLPELLQQLLSTTNYLTVAQLATTQLISTKQLQRDL
RELDKLLVGTPLSLIRKAHYGVRIQGNWQSRIHALQQYGLPPNHATLTQQLQPLGLDPAV
TAQFASEIGWSLVVTGQTLHAPPADTDFAALLAAIRLSPEAWHFLTVSFAAKRKQLTTRL
DHKRLKVKLRAYFTTLDARHETNFATHPEFLSLMYFHVLALIGRLKEHQSLAGLSLEPLA
RDYPIAFNWAVQFAQWLSREYQIEVPKTEVGYLTTHLLVPLEQAHEKWSRHGYRIAVICG
TGGGIATLLSLRLRRIFPEAVIQTFGLNELKAIHQLSPDLLFTVTALNESFDCPVIQIDE
VASDLDFASLRHELSMASQHHATASLADLLQPTLFFPDQKPADYRTLLTSLTAKMAAYCG
QVGYAASVLQREDFLATVYDNGIAIPHPLSFSARKNAVAVMLLPTGVKNSARPVRIVWLI
ALKQDQLPLHRTLTTQLAALMQKPDLINQLVQQTEFSAFQQTLRTELEGAETTWIYN
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgaacatctcatcattcaagcactacaagctaacggggttatgtccgcgatggcc
ttggccaaagcggttggggtatcacggcgcacgttgcaaaatgatttgcgcctgctaaac
cacgctgcgtcagggtttcaaatccgacttattcggggacgagggtatgaattacagatt
acagatacgaaacttttagctgcttatctagcgactttagcgggtcaggctcagccaaaa
atgccagccaaacgcttacctgagcttctgcaacaactgttatcgaccacaaactatttg
actgtggcgcaactggccaccacccagcttattagtaccaagcagttacagcgtgattta
cgcgagttggacaaactgctggttggaacgcccctgtcgttaatccgcaaagcccattac
ggcgtgcgaattcaaggcaactggcaaagtcgcatccatgcgctgcaacaatatgggtta
ccgcccaatcatgcaacattgactcagcaactgcagcctttaggactcgatccggctgtc
acggcccagtttgccagcgaaattgggtggtcgctagtcgtcacgggccaaacgttacac
gccccacctgctgatacagactttgcagcgcttttagccgctattcgcctaagtccggag
gcgtggcattttttaaccgtcagttttgctgccaaacgcaaacaactgaccacccgcctg
gaccacaagcggctaaaagtaaaactccgcgcttatttcacaacgctggatgcacgccat
gaaactaactttgccacgcatccggaattcctgtcgcttatgtacttccacgtcctcgcc
ttaattggccgactaaaagaacaccaaagtctggccggtctgagtctagaacctttggcg
cgcgattacccgatcgcctttaactgggcagttcaatttgctcaatggttaagccgcgaa
taccaaatcgaggtgccaaaaaccgaggtcggctatctgaccacccatctgctggtccca
cttgagcaggctcacgaaaaatggagccgtcacggttatcgcattgccgtgatctgcgga
actggcggcggcattgcaacgctgctgagtttacgcctgcgacggattttccccgaggcc
gtgattcaaacttttggcctcaatgagttaaaagcaatccaccaactttcaccggacttg
ctttttaccgtcacggctttaaatgaatcatttgactgtcccgtgattcagattgatgaa
gtggcttcggatttagattttgccagtttacgacacgagctatcaatggcatcgcaacat
catgccacagcgtcccttgcggatttgttgcagccgacgctatttttccccgatcaaaag
cctgccgactatcgcacgttactcacctccctcactgccaaaatggcggcatattgcgga
caagttggttacgccgcatcggttctgcagcgcgaagactttctggcgacggtttacgac
aacgggatcgccattccgcaccccttgtcattcagcgctaggaaaaatgctgtcgccgtg
atgcttttgccaactggcgtcaaaaatagcgcgcgcccggttcgcattgtgtggttgatt
gcgttgaaacaggatcaattacccttacaccgaaccttgaccacccaattggccgcgtta
atgcaaaagcctgatctcatcaatcaattagttcaacaaaccgaatttagcgcatttcaa
caaactttacggactgaactggaaggagccgaaacgacatggatttacaactaa
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