Lacticaseibacillus rhamnosus ATCC 8530: LRHK_608
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Entry
LRHK_608 CDS
T01961
Name
(GenBank) ABC transporter family protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Pathway
lra02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LRHK_608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lra02000
]
LRHK_608
01504 Antimicrobial resistance genes [BR:
lra01504
]
LRHK_608
Transporters [BR:
lra02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
LRHK_608
Antimicrobial resistance genes [BR:
lra01504
]
Gene variants
Macrolide resistance genes
Transporters
LRHK_608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
AAA_23
AAA_29
AAA_16
AAA_15
Dynamin_N
MMR_HSR1
ABC_tran_Xtn
AAA_18
AAA_28
NACHT
FtsK_SpoIIIE
MobB
ORC-CDC6-like
RsgA_GTPase
TsaE
nSTAND3
AAA_33
DUF87
AAA_30
MeaB
ATP-synt_ab
AAA_27
DUF815
YobI-ATPase
DUF5615
RNA_pol_Rpb1_2
Motif
Other DBs
NCBI-ProteinID:
AER63447
LinkDB
All DBs
Position
complement(600149..601633)
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AA seq
494 aa
AA seq
DB search
MSTIQIKHLHFAYDGQAPIFTDAGFDLDTNWHLGLVGRNGRGKTTLLRLLQKQLDYRGTI
TVPLPLQYFPQALDESQVTLDAAQAFNHVAQWQLERELNLLHADPAILWRPFADLSGGEQ
TKVRLALLFIQTDGFALIDEPTNHLDLRSRRQVAAYLQQKPGFIVVSHDRDFLDAVTDHT
LAIERQKITLYQGNYTTFATEKARQDQTEIAQNTHLKTEISRLKQTAYDKKLWAENKERS
IYGDRHVKNSGHRGRGFISARAARTMKKSKNLEHRMNKEIEEKEQLLKNLEKVDPLTMNP
QPTHQHQLIVAEKVQLGFDQPLFEPISFTLHRGDRIAIVGENGSGKSTLIRALLGQFNGI
SRGLLKLAPVSLSLVRQQYADNRGTLPDFAETHQLSREALLNNLRKLGMPRADFATPIEH
LSMGQQKKVEVARSLATPAALYIWDEPLNYLDTYNQDQIIAAVCQYQPTMLFVEHDEHFI
DQVATKMIRLHPLL
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccatccaaatcaaacatctacactttgcttacgatggccaagcaccgatcttt
actgatgccggtttcgatcttgatacaaactggcatctcggcttagttggccgtaatggt
cgcggcaaaacaactttgttacgcctattgcaaaaacaacttgattatcgcggtacgatc
accgtaccactgccgctgcaatattttccccaagcactcgatgaatctcaggtgacattg
gatgctgctcaggcgtttaaccatgtcgcccagtggcagcttgagcgcgaactcaactta
ttgcacgccgatcctgcgattctttggcgaccgtttgctgatttatccggtggtgaacaa
accaaagtgcgcttggctttgcttttcatccagactgatggctttgcactcatcgacgaa
ccaaccaatcaccttgatctgcgcagtcgccggcaggtagcagcttatttgcagcaaaaa
cccggcttcatcgttgtgagtcatgatcgcgattttttagatgctgtcaccgatcacacc
ttggccattgaacgccagaaaatcacgctatatcaaggcaactacacgacgtttgcaact
gaaaaagcgcgccaggatcaaaccgaaattgcccaaaatacccatttaaaaaccgaaatc
agtcggctcaaacaaacggcttatgacaagaaactctgggccgaaaataaagagcgcagt
atttacggcgatcggcacgttaaaaatagcggtcataggggtcgcggctttatcagcgcc
cgcgcagcaagaaccatgaaaaaaagtaaaaacctggaacaccggatgaacaaagaaatc
gaagaaaaagaacagctgctcaaaaatctggaaaaagtcgatcctttaacgatgaatccg
cagccgacccaccagcaccaattgattgtggcggaaaaggtgcaactcggttttgatcaa
ccgttattcgagccgatttcgttcaccttacaccgtggcgatcgcattgccattgttggg
gaaaacggcagcggtaaatcaaccttgatccgcgcattgctgggtcagtttaacgggatc
agtcgcggcctgttaaagttggcgcccgtatctttgagtctggtacgccagcagtatgcc
gataaccgcggtacccttccagactttgccgaaacccaccagcttagtcgcgaagcattg
ctcaataacttacgcaagcttggtatgccgcgcgctgattttgccacgccgattgaacat
ttgagtatgggccagcaaaagaaagtggaagtggcccgctccctggcaacgcctgcagcg
ctttacatctgggacgagccacttaattatctggatacctacaatcaagatcagattatt
gcggccgtctgccaatatcaaccaacgatgctctttgtcgaacacgatgaacattttatc
gatcaggttgccacaaagatgattcgcctacacccgttgctataa
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