Lacticaseibacillus rhamnosus ATCC 8530: LRHK_7
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Entry
LRHK_7 CDS
T01961
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lra03032
]
LRHK_7 (gyrA)
03400 DNA repair and recombination proteins [BR:
lra03400
]
LRHK_7 (gyrA)
Enzymes [BR:
lra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LRHK_7 (gyrA)
DNA replication proteins [BR:
lra03032
]
Prokaryotic type
DNA Topoisomerases
LRHK_7 (gyrA)
DNA repair and recombination proteins [BR:
lra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LRHK_7 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AER62866
LinkDB
All DBs
Position
7075..9687
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AA seq
870 aa
AA seq
DB search
MDDRQESRITNVNLGETMRKSFLEYAMSVIVARALPDVRDGLKPVQRRILYGMNELGVTP
EKPYKKSARIVGDVMGKYHPHGDSSIYEGLVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTEARMSKIAVEMLRDINKDTIDFQDNYDGTEKEPVVLPARFPNLLVNGATGIAVGMT
TNIPPHNLSETISALHVLMDHPDATTADLMQALPGPDFPTGGVVMGKSGIRHAYETGRGT
IVLRGKVDVQTEKSGRERIVITEIPYMVNKAKMVERIADLVHEKKIDGIVTLRDESDRDG
MRIVIDVRRDASASVILNNLYKLTPLQTGFSFNMVAIVNGAPKVLSLKQILQYYLDHQEN
VIRRRTQYDLKKAKAREHILEGLRIALDHIDEIITIIRSSETGDKAKVILMDKFNLSDKQ
SQAILDMRLVRLTGLERDKVESEYKDVEAAIADYTDILAKPERVHQIIYDELLDIQKKFG
DKRRTELLVGEVLSLEDEDLIEQEDVVITLSHNGYVKRLATSEFKTQNRGGRGIQGMNVH
DDDFVEHLISTSTHDVLLFFTNKGKVYRSKGYEIPEYSRTAKGIPIINLLGVGAGEKIQT
VINVHEGDNDDRYLFFVTQNGVVKRTPVKEFANIRSNGLIALNLKDQDELNNVILTSGQD
NILIGTHLGYSVAFKEQDVRSMGRTATGVRGIRLRDHDYVVGSDILKPDSEVFVISEKGY
GKRTAAKEYPIKGRGGKGIKTANITEKNGPLAGVTTVDGTEDILVMTDSGVMIRFNIQNV
SQTGRATLGVRLIRVDDDAKVATMAKVEPESDDPDDSSKPDQPTDPQAGPTDEHAQPADG
QYAGNADEQVNKLLDRAETDKPAPDDGDEA
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcgccaagaaagccggattacgaatgtgaatctcggcgaaacaatgcgtaaa
tcattccttgaatacgcgatgagtgtcattgtggcgcgggcattgcctgacgtacgtgat
ggcctcaaaccggttcagcgccggattctgtatggcatgaatgaactcggggtcacaccg
gagaagccatacaagaagagtgcgcggatcgtcggggatgtcatggggaagtaccatccg
catggtgacagctcgatttatgaagggcttgtgcggatggcgcaggactttagttaccgg
tatatgctggttgacggccacgggaactttggctcggttgacggtgacggtgcggcggcg
atgcgttacaccgaagcccggatgagtaaaattgccgtcgaaatgttacgcgacatcaac
aaagacacgattgattttcaggataattacgatggcaccgaaaaagaaccggttgttttg
ccagcgcgcttcccgaatctgctggtcaacggtgcgaccgggattgcggttgggatgacc
accaatattccgccgcataatctgtcggaaacgatttcggccttgcatgtgctgatggat
catcctgatgccaccaccgccgacttgatgcaggcattgccgggacccgattttccaacc
ggtggtgttgtcatgggcaagtccggtattcgccacgcatacgaaaccggtcgcggaacg
attgtgttgcgtggtaaagtcgacgttcaaactgaaaagtccgggcgcgaacggattgtt
attaccgaaattccttacatggtcaacaaagccaagatggtggaacggattgctgatttg
gtccatgaaaagaaaattgacggcattgtcaccttgcgtgatgaatccgatcgtgatggg
atgcggattgtcattgatgtccgccgcgatgccagtgcttcagttattttgaataatctc
tacaaactgacaccgctgcaaaccggtttttccttcaacatggtggcgattgtcaatggt
gcgccaaaggtattgagcctgaaacagatcctgcaatattatctggatcaccaggaaaat
gtcattcggcggcggacgcaatatgacctgaagaaggccaaggcacgggaacatattctc
gaaggcttgcgaattgcgcttgatcatattgatgaaatcattacgattattcgcagttcc
gaaaccggcgacaaagcaaaagtcatcttaatggacaagttcaatctgtccgataagcaa
agtcaggccatcctggacatgcggctggtgcggttgactggtctggaacgcgacaaggtt
gaaagcgagtataaagatgtggaggcagccattgccgactacaccgatattctggctaaa
ccggaacgtgttcaccagattatttatgatgaactgcttgatattcaaaagaaattcggt
gacaagcgccggactgaactgctggtcggtgaagtgctgagtcttgaagatgaagatctg
attgagcaagaagatgtcgtgattaccttgagtcataacggttacgttaagcgcttggca
accagtgaattcaagacgcaaaatcgcggtggtcgtggtattcaagggatgaacgtgcat
gacgatgatttcgtcgaacacctgatctccacttcaacccatgatgttttgctcttcttc
accaacaaaggcaaagtttaccgcagcaagggttatgagattccagaatacagccggacg
gcaaaaggaatcccgatcattaacctgctaggtgttggtgcgggcgagaagattcagaca
gtcattaacgtccacgaaggcgacaatgatgaccgctatttattcttcgtcacccaaaac
ggtgtggttaaacggacaccggtcaaggaatttgccaatatccgcagcaacggtctgatt
gcgctcaacttgaaggatcaagacgaactgaacaatgtcattttgacgtctggacaggat
aacatcttgatcggcacgcacttgggttacagtgtggcctttaaggaacaggatgttcgg
tcaatgggtcggacagccaccggggttcgcggcattcgccttcgtgatcacgattacgtg
gttggctccgatatccttaagccggattccgaagtctttgttatttccgaaaaaggctac
ggtaagcgcaccgctgccaaggaatatccaattaagggtcgcggcggtaaaggtatcaag
accgcgaatattactgagaagaatggtccgctggcaggggtcacaacagttgacggcacc
gaagatattctggtaatgacggactctggggtcatgattcgcttcaatatccaaaatgtt
tcgcaaactggtcgggcaacactaggcgttcggttgattcgggtcgacgatgatgccaag
gttgcaaccatggctaaggtcgaaccggaaagcgacgatccagacgacagcagcaaaccg
gatcagccaaccgatccgcaagccggaccaactgatgaacatgcgcaaccggctgacggg
cagtatgcaggcaatgccgatgaacaggttaacaaactgttagatcgtgcggagactgat
aaacctgcacctgacgatggcgatgaagcctaa
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