Lacticaseibacillus rhamnosus ATCC 8530: LRHK_762
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Entry
LRHK_762 CDS
T01961
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lra
Lacticaseibacillus rhamnosus ATCC 8530
Brite
KEGG Orthology (KO) [BR:
lra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lra03019
]
LRHK_762
03009 Ribosome biogenesis [BR:
lra03009
]
LRHK_762
Enzymes [BR:
lra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LRHK_762
Messenger RNA biogenesis [BR:
lra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LRHK_762
Ribosome biogenesis [BR:
lra03009
]
Prokaryotic type
rRNA helicases
LRHK_762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
CMS1
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
AER63598
LinkDB
All DBs
Position
753949..755295
Genome browser
AA seq
448 aa
AA seq
DB search
MDNQFKQYQLKPFVIAGLDAMGITQPTPIQKKVIPALLRGENLVGQSQTGSGKTHAFLVP
LLSLVDPNEDATQVVITAPSRELANQIYAVAQQLTQTEPAIRISRLVGGMDKQKQIDKLQ
AHQPHVAIGTPGRILDMIKRYDLVPASVRHFVVDEADMTLDMGFLETVDAIASSFPEHLQ
MAVFSATIPQKLEPFLRKYMDHPTVIELKPQSVIADTVENILIAAKGRDKNELIYQLVTM
GHPFLVLIFANTKTSVDAIHDYLKHQGLKVAKIHGGVQPRERRRIMKEVADLKYQYVVAT
DLAARGIDIKGVSMVINAEIPRDQEFFIHRVGRTGRNGLPGTAITLYEPGQEDQIAELEH
MGIKFKPKTIQKGELVDTYDRNRRVQRKPKQEDTSLAIRGLVKKAKQKHMPNYRKKIRTA
VLLERKRNAKVARRQALLAEKRKHLKRG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaattcaaacaataccaactcaagccttttgtgattgccggccttgacgcc
atggggattacccagccgacgccgattcaaaaaaaggtgatccctgcgttgctgcgtggc
gagaacctggtaggtcaaagccagactggtagcggtaaaacccatgcttttttggtccca
ttgcttagcctggtagatccaaatgaagacgcgacccaagttgtgattacggcgccatcg
cgggaacttgccaatcagatttatgcagttgcccaacaattgacgcaaaccgaaccagca
atccggattagccgtttggtgggcgggatggataagcaaaagcagattgataagctgcag
gcgcatcaaccgcacgttgcaattggcacacctggccgaattttggatatgatcaagcgc
tatgatcttgtgccagcatcggttcgtcattttgtcgtggatgaagcggatatgacttta
gacatgggctttttggaaaccgttgacgccattgcttcaagttttcccgaacatttgcag
atggccgttttttccgcgacgattccgcaaaagctcgaaccgtttttgcgcaaatacatg
gatcatccgaccgtgattgaactcaagccacaatcggttattgccgataccgttgagaat
attttaatcgcagcaaaggggcgcgacaaaaacgagctgatttatcagttagtgacgatg
ggccatccgtttttggtgttgatttttgctaatacgaaaaccagtgtggatgccattcat
gattatttgaaacatcagggactcaaggttgccaagattcatggcggggttcagcctcgg
gaacggcggcgaattatgaaggaagtcgctgaccttaagtatcagtatgtagttgccact
gatttggctgcgcgaggaatcgatatcaagggggtatcgatggtgattaatgccgagatt
ccgcgcgatcaggagttcttcattcaccgggtcgggcgtactggccgcaatggtttgcca
gggacagcgattacgttatatgagccgggccaggaagatcagattgctgaattggaacat
atgggcatcaaatttaagcctaagaccattcaaaaaggtgaactggttgacacgtacgat
cgtaatcgccgggttcagcgcaagcctaagcaagaggacacgagccttgccattcgcggc
ttggtgaaaaaagcgaaacaaaagcatatgccaaactatcgtaagaagatccggacagca
gtgttattggaacgcaagcgcaatgccaaagttgcgcggcgtcaagccttgctagccgag
aaacgcaagcaccttaaacgagggtga
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