Lacticaseibacillus rhamnosus LOCK908: LOCK908_0656
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Entry
LOCK908_0656 CDS
T02731
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrc03400
]
LOCK908_0656
DNA repair and recombination proteins [BR:
lrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOCK908_0656
Archaeal homologous recombinant proteins
LOCK908_0656
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
PUMA_CC
ABC_tran
nSTAND3
DUF5906
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGP73339
LinkDB
All DBs
Position
665522..668653
Genome browser
AA seq
1043 aa
AA seq
DB search
MKLKQLHMQFFGPYADETVNFEDFRTSPLFLISGPTGSGKTTIFDALVYALYGETSGERD
GMQMRSNFASHHDLTKITLTFDHDGKHYRVVRQPQQIQQKKRGDGLTEVKAKALLAIADA
DKQVAEYTKKNQVQSQLDAILHLDAKQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMQAQTKQQGAAIQDQERMLNLLTSQFEFDTPPSDTATMADKLALMHQDVTQ
QATTVTNLQTMADQRHQRYQTAQTALQTGKQLAQAFEDRKQTAAALAQLAEQKQTQEDRL
KLMERLTWVQEHEAAEQRVQKVARDLTLAKTQLVQTQTAIKTTQQAMNQAQTKLNDLQQQ
DSAIEAQKTQLDQLQSVKQQLVAIAAQEKQVAQQTAAVAQAEAASVQAQKKLADDQKKLD
QYQTELNQLAVSDLADRAADHKQLVAALKPVAANYQDAHAEAEQLASKLTDTKTLLIQAT
NASQSAEQQLNQLQQTQIRQQIAQLAAKLTPGTPCPVCGSVEHPHPAVALDEPLVTEAEV
KRATQARQQAAAKETTMQAQVSNLEEQHAAATKKADIAKNSFWAQVSSSIDAVSPQVEQP
DILKQLAILEEKAQTAVQALSAAQIRQDALRKAITVGQTVVSADDQEIQATQSALNTAKI
EAAKANSALTTMKASLPAGTTDLKTVTEQSHVLTEAIKTHQEQLKTAQRQLSEFDRQLAG
LHADERHATDQITTLKKEHQEAEDDFLSAVTDYFGSDGVAKFAAMREKLGQLPLLQQQTQ
RYKDDVLKQQTLLAAANKTIGNQPQPALDQLEAQASAAEVEATKAQTAFIEAKQKHDTAQ
KLLKQAADILAANQTALAAYADLQTLTAVMNGNGPKKLSLERYVLQAYLQEVLDVANTRL
QVLSNQRYQFVLHTDLGTQKIHSGLEIDVYDDQVGERRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDTNSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVQPAGTGRSRIRVMHMASA
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacttaaacaattacacatgcagtttttcggaccctatgcagatgaaacggttaat
tttgaagattttcgcacgagcccgctattcttaatcagcggaccgactggcagcgggaaa
accacgatttttgatgccttagtgtatgcgttatacggcgagacgtcaggggaacgcgat
ggcatgcagatgcggtccaactttgccagccaccatgatctgactaaaattacgttaact
tttgatcatgacggtaaacattatcgggtagtgcgccagccgcaacagatacagcaaaaa
aaacgtggtgatggactgactgaggtcaaagcaaaggccttattggcgattgcagatgct
gataagcaagtggccgaatataccaaaaaaaatcaggtccaaagccagcttgatgcaatt
ttacatcttgatgctaaacaatttcggcaaattgttttactgcctcaaggagactttcgg
cgttttctagatgccgacagtaatgccaaagaagatttactgcgggatttatttgggacc
cagttgattcaacgctggcaaacagctatgcaagcacaaaccaagcagcagggagccgcg
attcaggatcaggaacggatgctgaatttgctgacgtcacagttcgaatttgacacgccg
ccatctgacaccgcaacgatggctgacaaattggccttgatgcatcaggatgtaacgcag
caagcaacaaccgtcaccaacctgcaaaccatggcagaccaacgccaccagcgctatcag
acggcccagacagctcttcagaccggtaagcagttggcacaagcatttgaagaccgaaaa
caaactgctgcggctttggcacaacttgctgaacaaaagcagacgcaggaagaccgcctc
aagttaatggagcggttaacctgggttcaagaacacgaggcagctgagcaacgggtacaa
aaagtagctcgcgatttaactctagccaagacgcaattagtacaaacccaaacggcaata
aaaaccactcagcaggccatgaaccaggcccaaacgaaattaaatgatttgcagcaacaa
gattcagctattgaagcccaaaagacgcaacttgatcaactgcaatcggttaaacagcaa
ctcgttgcaattgcggctcaagaaaaacaagtagcccaacaaaccgcagcagttgcacag
gcagaagcagcgtctgtacaggcgcaaaaaaaattggcagatgatcagaaaaaacttgat
caatatcaaaccgagttgaaccaactagcggtgtcagatttggcagatcgagcagctgac
cataaacaattagtggcagcgctgaaaccggtagccgctaattatcaagacgcacatgct
gaagctgaacaacttgccagcaagctaacggacacaaagacgttactgattcaggcgaca
aatgcgagtcaatctgccgagcaacagttgaatcaattacaacaaactcagatccggcaa
caaattgcccaattggcggctaagttgacgcccgggaccccttgcccggtttgcggcagt
gtcgagcatccacacccggctgtagccttggatgaaccgctggtgactgaggctgaggtg
aaacgggctacccaagcgcgccagcaagcagcggcaaaagaaacgactatgcaagcccag
gtatccaacctagaagaacagcacgctgccgctaccaaaaaggcagatatagcaaagaac
agtttttgggcacaggtgagctcaagcatagatgcagtgagtccccaagttgaacagcca
gatattttgaaacagctggcaatacttgaagaaaaagcacagactgcagttcaagcgtta
tccgcggctcagatcaggcaggatgcattgagaaaagcaataacagttggtcaaactgtt
gtgagcgcagatgatcaggaaattcaagcaacccaaagtgcgcttaatacagcgaagatt
gaggcggcaaaagctaacagtgcactgacgaccatgaaagcaagtttacctgcaggcacg
actgatcttaagacagtaaccgaacagtcgcatgtcttgactgaagcaatcaagactcac
caggaacaattaaaaacggcgcagcgtcaattaagtgagttcgatcgccagttagcaggc
ttacatgcagatgaacgccatgctactgaccagatcacgacactgaaaaaagagcaccag
gaagcagaagatgactttttatctgcagtaactgattattttggttcggatggtgtcgca
aaatttgctgccatgcgcgagaaattagggcaattaccacttttgcagcaacaaacgcag
cgttataaggatgacgttttaaagcagcagacattactggcagccgctaacaagacgatt
ggcaatcaaccgcaacctgcccttgatcagcttgaggctcaagcaagtgcagctgaagta
gaggcaacaaaagcacaaactgccttcattgaagcaaagcagaaacatgatacggcccaa
aaattgctcaaacaggccgcagatattttagcggccaatcagactgctttggccgcctat
gccgacttgcagacactgaccgccgttatgaacggcaatggtcccaagaagcttagtttg
gagcgctacgttttacaagcctatcttcaggaagttttggatgttgccaacacccgcttg
caagtgctttccaatcagcgctaccaatttgtgttgcacacggatttgggaactcaaaag
atccattcgggtttggaaatcgatgtttacgatgatcaggtgggtgaacgccgcgcagtt
caaacactatctggcggtgaaagctttattgctgcgttgagccttgcattggcactgggc
gaggtgattcagcaagaaagtggcggcatcaatatcgatgctttgtttgttgatgaaggc
ttcgggagtttggatactaatagccttgatgtggcaatgaacgcgcttgaatcgctagaa
ggcgagtcgcgattgatcgggattatttcgcacgtgacggaattaagggataatattcct
gatcagttgcaggtgcagccagcagggacaggacggagtcggattagggtgatgcatatg
gcgtcggcgtaa
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integrated database retrieval system
