Lacticaseibacillus rhamnosus LOCK908: LOCK908_0916
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Entry
LOCK908_0916 CDS
T02731
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrc03009
]
LOCK908_0916
Enzymes [BR:
lrc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
LOCK908_0916
Ribosome biogenesis [BR:
lrc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LOCK908_0916
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AGP73562
LinkDB
All DBs
Position
893663..894373
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AA seq
236 aa
AA seq
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MRLDKYLSHLQFGSRKEVKALIRDKRVRIAGELVTDPGYNILPGVAVEVNDAQADGPLEV
DYLMNKPAGVITATEDPTQSTVLDLIRPHDYRPGLYPVGRLDKDTTGLLLLTTDGNLGHT
LLAPNHHVPKTYAAKLAKALTTEMKHQLEHGVALKDFTTAPADVQVVPATDNKEIYITIT
EGKYHQIKRMLLAVDNEVVALTRIAMGPLRLPEDLDAGEYRALTDDERSLLDQMVR
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagataaatatttaagtcatttacagtttggtagtcgaaaagaagtcaaagcc
ttgattcgcgacaagcgcgttcggattgctggggagttagtgacggatccgggctacaat
attcttccgggtgttgccgttgaggttaatgatgctcaagcggacgggccacttgaagtc
gattatttaatgaacaaaccggctggcgtcatcaccgcaaccgaagatccaacgcaatca
acggtattggacttgattcgaccgcatgattatcggcccggcctttatccagtcgggcgc
cttgataaagatacaaccggactgctattgctcacaactgatggcaatttagggcatact
ttgttagcaccgaaccaccatgtgccaaaaacttatgccgctaagttagccaaggcactt
acaactgagatgaaacaccagttagaacatggcgttgctttaaaagactttacaacggca
ccagctgatgttcaggttgtaccggcgactgacaataaagaaatttatatcacaattaca
gaaggcaaataccaccaaattaagcggatgttgctggccgttgataatgaagtcgtcgca
ttgacacgaattgcaatgggaccattacgtttgcctgaggacttagacgccggtgagtat
cgggcactgacggatgatgagcgttcgctactggatcagatggtacgctaa
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