Lacticaseibacillus rhamnosus LOCK908: LOCK908_1223
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Entry
LOCK908_1223 CDS
T02731
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Pathway
lrc00260
Glycine, serine and threonine metabolism
lrc00460
Cyanoamino acid metabolism
lrc00630
Glyoxylate and dicarboxylate metabolism
lrc00670
One carbon pool by folate
lrc00680
Methane metabolism
lrc01100
Metabolic pathways
lrc01110
Biosynthesis of secondary metabolites
lrc01120
Microbial metabolism in diverse environments
lrc01200
Carbon metabolism
lrc01230
Biosynthesis of amino acids
lrc01240
Biosynthesis of cofactors
lrc04981
Folate transport and metabolism
Module
lrc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LOCK908_1223
09102 Energy metabolism
00680 Methane metabolism
LOCK908_1223
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LOCK908_1223
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LOCK908_1223
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LOCK908_1223
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LOCK908_1223
Enzymes [BR:
lrc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LOCK908_1223
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AGP73862
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Position
1180290..1181522
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AA seq
410 aa
AA seq
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MDLMAHDPEVFRAIHEEEARQEHNIELIASENIVSPAVRAAQGSVLTNKYSEGYPGHRYY
GGNQYIDVVENLAIERAKKLFGAEFANVQPHSGSQANMAAYRAFLEDGDKVLAMDLTDGG
HLTHGSPVSFSGQEYHFYHYGLDPKTERLDYAKIREQAEQVKPRLIVAGASAYSREIDFK
KFREIADHVGAFLMVDMAHIAGLVAAGLHMNPVPYSDVVTTTTHKTLRGPRGGMILAKAE
YGKAINSALFPGIQGGPLDHVVAAKAVALGEALQPAFKTYAQQIIDNMHAMVAGFKEDEH
LRLISGGSDNHMVLVDVTGYGVNGRQVQDLLDEVDITTNKNQIPGEQNGPFKTSGIRVGT
AAITTRGFTPEESKRVAELISMAIAHRDEQPVLDQIRQEVLALTARHPLS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggatttaatggcgcatgatccagaagttttccgcgcaattcacgaagaagaagcgcgt
caggaacataatatcgaactaattgcttcggaaaatattgtttctccggcagtgcgggcg
gcacaagggtcggtgttgacgaataagtattctgaaggctatcccggtcatcgttattac
ggtggcaatcaatacatagacgtggttgaaaatcttgctattgagcgggcgaagaagctt
tttggtgctgaatttgccaatgttcagccgcattctggttcgcaggcaaacatggcggca
tatcgggcgtttcttgaagacggcgataaggttttggccatggacttaacggatggcgga
catctcacccatggtagtccggtcagttttagtggtcaggaatatcatttctaccattat
ggtttggacccgaaaacagagcgcctcgactatgccaaaattcgcgagcaggcagaacaa
gtcaagccgcgtttgattgtggctggtgcgtccgcttacagtcgggaaattgattttaaa
aaattccgcgaaattgctgatcatgtcggtgcctttttaatggttgatatggcgcacatt
gcgggcttggttgcggcgggattgcacatgaatccggtgccgtattcagatgtggtcacg
accacaacgcataagaccttgcgtggaccgcgtgggggcatgattttggctaaggcggag
tatggcaaagcaattaattcagccttgttccccggcattcaaggcggaccactggatcac
gtggtggcagctaaggcggtggcattaggcgaagcgttgcagccggcgtttaagacttac
gcgcagcagattattgacaacatgcatgcgatggtggcaggtttcaaggaagatgaacac
ttacgcttgatttccggcgggtctgacaatcacatggtcttagtcgatgtcaccggttac
ggggtcaatgggcgccaggttcaggacttgctggatgaagtcgatatcaccacgaacaag
aatcaaattcccggcgagcaaaatggtccgtttaaaaccagcggcattcgggtcgggaca
gctgcgattaccacgcgtggatttacgccagaagaaagcaaacgcgtggcagaactcatc
agcatggccattgcgcatcgtgacgaacagccagttttggatcaaattcggcaagaagtt
cttgcactgactgcccgtcatcccttatcatag
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