Lacticaseibacillus rhamnosus LOCK908: LOCK908_1559
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Entry
LOCK908_1559 CDS
T02731
Name
(GenBank) ATP-dependent nuclease, subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrc03400
]
LOCK908_1559
Enzymes [BR:
lrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOCK908_1559
DNA repair and recombination proteins [BR:
lrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LOCK908_1559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
PDDEXK_1
AAA_12
ResIII
NACHT
Herpes_ori_bp
Med15_M
Motif
Other DBs
NCBI-ProteinID:
AGP74198
LinkDB
All DBs
Position
complement(1515058..1518768)
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AA seq
1236 aa
AA seq
DB search
MTQFTPSQQAAISHHGHDMLVSASAGSGKTTVLVERIIQKILKQHADITRMLIVTFTRAA
TSEMRTKIQTALKQTLTAKRHELNAEDRRHLANQIAMVNAAKISTLDAFSLQIVQTYYYV
IDLDPGFRLLTDETERYMLQEQVWNDLREQFYAGDEAAEFEQLTANFSGDRDDSGLQDLM
FELMRQAAATTDPKAYLQQLAKPYAPEAWAATFTHQIWPRTKRKLMQVFTTLTQADELAN
RLPNPVWHQQITADLNPLQSLLDNPEPSYEAVRDALVQHDFLAWSRASKGLDDDDKALKN
EAKQLRDAAKKIWQDQLAPDFALTSEQITDLLRTVQPMMTMLTEVALTFLDALTAEKAVR
HVQDYSDIAHNALRILQQKDPQTGAPIADNYRASFDEVMVDEYQDISPLQEALLAAVSTT
DPGDRFMVGDVKQSIYGFRLADPQLFIQKYQAFANHPETPTAPERIILAENFRSTKNVLA
FTNLIFSQIMDPEVGDLAYDDNAALKYGALDYGDCHPAVKVMLYSKATSDDDDETDATSD
WSATDEDDEPLDVATGQTQMVIAEIQRLVSDPHAQLWDRANQQYRRIRYRDITLLTRQTT
QNSLIQTQFAAAGVPLFVADTKNFFKTTELMVMLALLKIIDNPKQDIPLVAVLRSPIVGL
SADQLALIRLAAKQVPYYDAVTAFLTGTPTTPLAKRTHATLAAFLDQLNHFRDLARENDL
VTLLWAIYQETGFLDYVGGTPGGSQRQANLLALVDRARTYESGGFKGLFAFIHFITLMQK
QDQDLATPAQVDPDNDAVKLMTIHKSKGLEFPVVFVLQTNKHFNRRDQSGPAILTKNGIG
IKWLDPQTRVEYELPQYQAAKAARQNQTLAEEMRLLYVALTRAQQRLYVVGATMSGQQLT
SADKTVAKWAKAAEGEQLTLAPQIRGAATNYLDWIGPALIRHPQVKGLTETTVKPALIAD
PTEFSIAIETHPQIKVGVATKTPAKTDAPAIDLTGWFAKQYPFQAATTTAGFQSVSEIKR
AFDDPDTMELVSADRFLGQKPPLHDLSAPAFLTETSGGGNAAAIGTATHLLLQLVDLTKP
ITLNSLEALRHHLITTGVMPAEVAKRIDLTALVRFFATDLGQLLQAKPQQVQREVPFSML
LPANQLFEILQNDPGEDVLVHGIMDGYVTEADGVTLFDYKTDHEPDPAKLVARYRGQLNL
YAQALAQLQPEPVTHRYLVLLRTGTIVDLVAESTGK
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatttaccccatcgcaacaagctgccattagccatcacggccatgatatgttg
gtatcagcctcggctggcagcggcaagaccactgtattagttgaacgcattattcaaaag
attctcaaacaacacgccgatattaccagaatgttgatcgtgacttttacgcgagcggca
acttcggaaatgcggactaagattcagactgccttgaagcaaacactgaccgccaagcga
catgagttaaatgctgaggatcggcgccatctggccaaccagattgccatggtgaatgca
gccaaaatcagtacgttggatgcgtttagcttgcaaatcgtccaaacttattactatgtt
atcgatttagatccaggctttcgattactgactgatgaaactgagcgctatatgttacaa
gaacaggtttggaacgatttgcgcgaacaattttatgctggtgacgaagcggcggaattc
gagcaattgaccgctaactttagcggcgatcgggatgatagtggccttcaggatttaatg
ttcgagttaatgcgccaagctgctgccacaaccgatcctaaagcttacttgcaacaactg
gcaaagccttatgcaccagaagcttgggcggcgaccttcacgcaccagatttggccgcga
accaagcgcaaactcatgcaagtatttaccacgctgacgcaagcggatgagctggccaac
cgcttgccaaatccagtctggcatcaacaaatcacggccgatttgaacccgttacaaagt
ttattagacaaccctgagccgagctatgaagcggttcgcgacgccttagttcagcatgac
ttcttggcgtggtctcgcgccagcaaaggtcttgatgacgacgacaaagcactcaaaaat
gaggctaaacaactgcgggatgccgctaaaaaaatatggcaggatcagttggcaccggat
tttgccttaacgagtgagcaaatcaccgacttactgcgcacggtgcaaccgatgatgacc
atgctgacggaggtggccttaacctttttagatgcgctgaccgcagaaaaggcggttcgg
catgtgcaagactatagcgatattgcgcataacgcactgcgaatcctgcagcaaaaagat
ccccaaaccggcgcaccgattgctgacaattatcgcgccagtttcgatgaggtgatggtc
gacgagtatcaagacattagccccttacaagaagcgttactggcagccgtcagcacaacc
gaccccggcgatcgctttatggtcggggatgtgaagcaaagtatctatggatttcgctta
gctgacccgcagttattcattcaaaaatatcaggcgtttgccaatcatccggaaacaccc
accgcacctgaacggattattttggcagaaaattttcgctcgactaaaaatgttttggcg
ttcaccaatcttatttttagccagattatggatcctgaagtcggcgatttggcttatgac
gacaatgctgcgttaaagtatggtgcgcttgattatggcgattgccacccagcggtcaaa
gtcatgctgtatagcaaagcgacttcggacgatgatgacgaaaccgacgcgacttcggac
tggtctgcaaccgatgaagatgacgagccgctggatgttgcgaccggtcaaacgcaaatg
gtcattgccgagatccagcggttagtttcggacccccatgcacaattatgggatcgcgcc
aaccagcaatatcggcgtatccggtatcgtgatattacgcttttaacacgccaaaccacc
caaaacagcctcattcaaacccaatttgctgcagccggcgtaccattattcgtggctgat
accaagaatttcttcaagacgacggaattgatggtgatgctggcactcctcaaaatcatc
gataatcctaagcaagatattccgttagttgcggttttgcgctcgccgattgtcggcctc
tcagctgatcagttagccttgattcgattggcagccaaacaagtaccttattatgacgcg
gtgaccgcttttctcaccggaacaccgacaacgccgctggctaaacgcacccacgctact
ttggccgcgttcttggaccaactcaatcattttcgcgatctggcccgggaaaatgatcta
gtgacattactgtgggccatttatcaggaaaccggctttctcgattatgttggcggcacc
cctggcggcagtcaacgccaggcaaatttacttgccttggttgatcgtgctcggacttat
gaatctggcggctttaaaggtttgtttgccttcattcatttcattaccttgatgcaaaag
caggatcaggaccttgccacaccggctcaggttgatccggataatgatgccgtcaaattg
atgacgattcacaagagtaaagggcttgagttccccgttgtttttgtcttacaaacgaac
aaacactttaaccgtcgcgatcaaagcggaccggcaattttaactaaaaatgggatcggt
attaagtggctcgacccgcaaacccgggtggaatatgagttaccgcaataccaagccgcc
aaagccgctcgacaaaatcaaacattggctgaagaaatgcgtcttttgtatgtggcgttg
acgcgtgcccagcaacgcctctatgttgttggcgcaaccatgagcgggcagcaattaact
tcggctgacaaaacggtcgccaagtgggccaaagccgcggaaggtgaacagctcacactt
gcaccgcaaattcgcggggcggcaacgaattatctggattggatcggaccggccctcatt
cgtcatccgcaagtcaaaggactgactgaaaccaccgtcaaaccggccttgatagctgat
ccaaccgagttttccattgcaatcgagactcatccgcaaattaaagtcggagtggcgacc
aaaacgccagccaaaacagatgcacctgcgattgatctgacaggatggtttgccaaacag
tatccattccaagctgccacgacaacggcaggctttcaaagtgtttcggaaatcaagcgg
gcttttgacgatccggatacgatggaacttgtaagtgccgaccgatttttagggcaaaaa
ccgccgctacacgatttaagtgccccagcatttttgaccgaaacttccggtggtgggaat
gccgctgcgattggaacggcgacgcatttattgctccaattggttgacctgaccaaaccg
attacgctgaacagtctagaagccttgcgccaccacttgataaccaccggggtcatgccg
gcagaggttgccaagcggattgacctaactgctttggtgcgcttttttgcaaccgatcta
gggcagttattgcaagctaagccgcaacaggtgcaacgggaagtgccgttttccatgttg
ttgcctgccaatcagttgtttgagattttacaaaatgaccccggcgaggatgttttggtt
cacgggattatggacggttatgtgactgaggccgatggtgtcacgttgtttgactacaaa
accgatcacgagcccgatccggcaaagttagtcgcgcgttatcgtggccaactgaactta
tacgctcaggccctggcgcaacttcaacccgagccggttacccatcgttatctggtcttg
ttacggacaggaacgattgtggatttagtagcagagtcaacagggaaatag
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