Lacticaseibacillus rhamnosus LOCK908: LOCK908_1560
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Entry
LOCK908_1560 CDS
T02731
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lrc
Lacticaseibacillus rhamnosus LOCK908
Brite
KEGG Orthology (KO) [BR:
lrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrc03400
]
LOCK908_1560
Enzymes [BR:
lrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOCK908_1560
DNA repair and recombination proteins [BR:
lrc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LOCK908_1560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AGP74199
LinkDB
All DBs
Position
complement(1518765..1522523)
Genome browser
AA seq
1252 aa
AA seq
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MAKARPSRPRPLILRSLTAPARAHFSITRSPAQKSACKDLSRNGQIRAITSEAAYTPTSN
RAGSRSLSLGGFHMGLQFILGDATTDHTQTMAAMIHEKLTADSQNRIFLLVPNHIKFEAE
IDLLKRLRQLQQGNSETYVQSRVQVLSFSRLAWFYLKNTPLYQQPRLDQASNTMLVAKIL
AERQADLTIYAGEAQHTGFVTQLAGQLSELMIGRITAEDLANTVAALTPGDRHRAKLRDL
GIILDQYEAEIGPYATTASLLSGLQQAMRTHDLTHTFIYLNHFNVFSASESALVETMLET
AAEVTIGLVLDRPYPTAPPVAPNLFLPAGRLYHRLYQKAKTMRIPIRLDRFAQPRHLSLG
MRQVASWWQANTNIEPQPAPTANVADHVHLATATDPYQELRHVAQSIYQAVRNGARYRDF
VIIARRLDPYATIIPAIFAEFQIPQFTDLQRPMKDHPLVVLIESLFAIQDHDYQYQDIMR
LLHTELLLPQGMAVADFRDAVDTLDNHLVRTGIAGKRRWTQTEPWRYFQRNPAADETEMD
PEADKTAQINAIKTLVAQTVPALLKQWQAAKTGLEAARSLYHWLTKIGVVDQLNAWREAA
SAAGELARSRAHEQAWTTFTALLDDYVTILGNAKFNREQFHELLAAGFASATYTQIPATL
DAVVISETGLVRLAKAKHVFVIGATSTAMPDVPNDDGVLNSEERQLLAAQLPDDRFLPEQ
GPTTTLGDPFINYLGFMAASETLTLSYPMQNPQENSENQASPYFQQLKRALHLVPETWAP
VTLATTVKSVLGSPRAMLSDFIRAAGDAQQQKQPLSLAWQSVLSALKQTDLANLAQRLAG
SLTYQNDPGRLDPQLAVQLYGRDMNVSVSRLETYYLNHFEYFLKYGLLLQPRPEFELSPA
DTGSLFHAVLDRYLTQLRDQQQNLADVEPAAIMAAVPPMVAEIAKQPGYEILGSTYRMTY
LTKRLSRLLIQVLLNMRQQQQRSGFRPVRTELQFGRIGDTKGLPGLSWPLPHGGRVNVHG
KIDRLDIYREPDARRFIIVDYKSGQRRFDDSDAYYGIALQMLTYIEAMTNVTAEPPFVPA
GALYFHLQDPKLKYTPELEPALERLKAFKYLGFLVAEHGDELAAVDRTISPESGGRSEIA
PLGFKKDGSFNQNQSNVLTPEALRAYLAHNQALIIDAATQILAGDIALEPFQYGQSSTIV
SRSDYQSIMLFDPATGFDHYHHVPKLKRKDVIGRLTADPTQIPHSEKEHPQS
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcccggccatcacgcccaaggccgcttatactccgatccctaaccgcgccg
gctcgcgctcacttttctataacgcgctccccggcgcagaagtctgcgtgtaaggacctc
agccgcaatggccaaatccgggccatcacgtctgaggccgcttacactccgacttctaac
cgcgccggctcacgctcactttccttaggaggttttcacatggggttgcagtttattctc
ggtgatgcaacgacggatcatacccaaaccatggcggctatgattcatgaaaagcttacc
gctgattcccaaaaccggatttttttactggtaccgaaccatattaaatttgaagcagaa
attgatcttctcaaacgcttgcgccaattgcaacaggggaactcggagacttacgtgcaa
agtcgcgttcaggtcttatccttttcccggctggcctggttttatttgaagaacacgccg
ctttatcagcaaccacggctggatcaagctagcaatacgatgctggttgccaaaattctt
gcagaacggcaagcggacttaaccatttatgccggagaagctcagcacactgggtttgtc
acacagcttgctggccaattgagtgaactcatgattggccggattaccgccgaagactta
gccaataccgttgcggctctgacaccaggcgatcggcaccgggctaagttgcgtgattta
ggcattattcttgatcaatatgaagcagaaatcggtccttatgcgacaaccgccagtctg
ctaagtgggctgcagcaagccatgcgtacccatgatctcacccacacgtttatctatctc
aaccattttaacgtattttctgcttcagagtcagcactggtggaaacgatgctggaaacc
gccgcagaagtgacgatcggcctcgtgttggatcggccttatccaactgcaccgcctgtg
gctcctaatctctttttacctgctggtcggctttatcatcgtttgtatcaaaaagccaaa
acgatgcgaattccaattcggttggatcggtttgctcagccacggcacttaagcttgggc
atgcgacaggtggcgagttggtggcaggctaataccaatatcgaaccgcagccggcgcca
accgcaaatgttgccgatcatgtgcatttagccactgcgactgatccctatcaggaattg
cggcatgtggcccaatctatctatcaagcggttcgcaacggagcacgttatcgggatttt
gtgattattgctcggcgattagatccgtacgcaacgatcattccggctatttttgctgaa
tttcagattccacaatttaccgacttgcagcggccgatgaaggatcatcccttggtggtg
ttaatcgaaagcctatttgccatccaggatcatgactatcagtatcaagacatcatgcgc
ttgttgcatactgagcttttgttgcctcaggggatggcggtggcagattttcgtgatgcc
gtcgataccctcgacaatcatttggttcgaacagggattgcaggtaaaagacgctggaca
cagacagaaccatggcggtattttcagcgtaatcccgctgctgatgagacagaaatggat
cctgaagccgataaaaccgctcaaatcaatgccataaaaacgctggtggctcaaactgtg
ccggccttactcaaacaatggcaggcagctaaaaccggacttgaggctgcgcgaagtttg
taccactggttaacgaaaattggggtagtggaccagttgaacgcgtggcgagaagcagca
agtgcagccggtgagcttgctcgcagtcgagcgcacgaacaagcatggaccacatttacc
gctttgctggatgattacgttaccattttgggcaacgctaagtttaatcgcgagcaattt
catgagttgcttgctgccggctttgccagtgcgacttacacacagattccggccacactt
gacgcggttgtgatttcagaaaccgggttagtccgattagccaaagcaaaacatgttttt
gttatcggggccaccagcaccgccatgccggatgttcccaatgatgacggcgttttaaac
agtgaagagcgccaattattagctgcacagttgccggatgaccgctttttacccgagcaa
ggtccaacaacaactttaggtgatccgtttatcaactatttgggcttcatggccgccagc
gagacgttgacgctaagttaccccatgcaaaacccgcaagaaaatagtgaaaatcaggcg
tcaccttattttcagcaactgaaacgggcgcttcatctcgtgcccgaaacctgggcgccg
gtaacactcgcgacaacggtcaaatctgtccttggcagcccgcgggcaatgttaagcgac
ttcattcgggctgccggtgatgcccaacagcaaaaacaacccctgagtctggcttggcaa
agtgtgttaagcgcattgaaacaaaccgatttagccaacctggcccaacgccttgccgga
agtttgacgtatcaaaatgatcctggccgccttgatccacagctggcggtgcaactctat
ggccgcgatatgaatgtttccgtgtcgcgattggagacgtattatcttaatcatttcgaa
tatttccttaaatatggtttgctgctccaaccgcgaccggaatttgagctttcaccagcc
gacaccggtagtctttttcatgctgtacttgatcggtatttaacgcaattgcgtgatcaa
caacaaaacttggccgatgttgaacccgcggcgatcatggctgccgtaccgccaatggtt
gccgagattgccaaacagccggggtatgaaatcctcggcagtacgtatcgcatgacttat
ttgaccaagcgcttaagtcgactgctcattcaggttttgctcaacatgcgccagcaacag
caacgcagcggcttccgcccggtgcgcaccgagctgcagtttggccggattggcgatacc
aagggactgccaggcttatcatggccgttgccgcatgggggtcgcgtcaatgttcacggt
aaaatcgatcggcttgatatttatcgcgaacctgatgcccggcgttttattattgtcgat
tataaaagtgggcaacgccgcttcgatgatagtgacgcttattatggcattgccttgcaa
atgctgacttacattgaagcaatgaccaacgtgacagcagagccaccgtttgttccggcg
ggggcgctgtattttcacttgcaggatcctaaactcaaatacacgcctgaattggaaccg
gcacttgagcgactcaaagccttcaagtatctggggttcttagtcgccgaacacggagat
gagctggcggccgtggatcgtaccatttcaccggaaagtggcggtcgtagtgagattgca
ccgcttggctttaaaaaagatggcagtttcaatcaaaatcagtcaaacgtcctgactccc
gaggcgttgcgggcttatttggctcacaatcaggcgctgattatcgatgcagccacgcaa
attctcgctggggatattgcacttgagcctttccaatatggccagtcttccacgattgtc
agtcgcagcgactatcaaagtattatgctgtttgaccctgcaaccggttttgatcattac
catcacgtccctaagttaaagcgtaaagacgtgatcggacgccttaccgctgacccgaca
caaataccgcattctgaaaaggagcatccacagtcatga
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