Lolium rigidum (rigid ryegrass): 124646481
Help
Entry
124646481 CDS
T09103
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124646481
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124646481
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124646481
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124646481
03041 Spliceosome [BR:
lrd03041
]
124646481
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124646481
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
124646481
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124646481
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
124646481
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124646481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
124646481
NCBI-ProteinID:
XP_047042543
LinkDB
All DBs
Position
4:71381920..71388013
Genome browser
AA seq
325 aa
AA seq
DB search
MMMTRASMGAMEGAAVDEIVRRLVDGGRGGRQVQLSEAEIRQLCVDAKRVLLSQPNLLQI
RGPVKICGDIHGQFVDLLRLFDLGGYPPTSTYVFLGDYVDRGKQSLETICLLLAYKIRYP
DKVFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFSDCFNCLPIAALIDDKILCMHGG
LSPELDNLDQIKDIERPAEIPDYGLLCDLLWSDPSPSGEGWGESDRGVSYTFGADKLIEF
LEKNDLDLICRAHQVVEDGYEFFAQRRLVTIFSAPNYCGEFDNVGALLSIDENLMCSFQI
LKPNEPGTPRVRRQIPNKPAIAESA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacccgggcctccatgggggccatggagggcgcggcggtggacgagatcgtg
cggcgcctggtcgacggcggccgcggcgggcgccaggtgcagctgtcggaggcggagatc
cggcagctctgcgtcgacgccaagcgcgtgctcctctcccagcccaacctcctccaaatc
cgcggacccgtcaagatctgcggtgatattcatggtcaatttgttgatcttctgaggttg
tttgatttgggtggttatcctccaacttcaacttacgtattcctcggagactatgtagat
agaggcaaacagagcttggaaactatatgcttgctgctggcatacaaaataaggtatcct
gacaaggttttcctgttacgggggaaccatgaagatgcaaaaatcaacagagtttatggt
ttctatgatgaatgcaagaggaggttcaatgttcggctgtggaagatattctctgattgc
ttcaactgcctgcctattgcagcactcattgacgacaagatattgtgcatgcatggtggc
ctttcacctgaactggataacctagaccaaataaaggatattgagaggccggctgaaatt
cctgattacggtctcctgtgtgatttgctttggtctgatcctagccccagtggagaagga
tggggggagagcgacagaggtgtttcatatacgtttggcgcagataaacttatagagttc
ttggagaagaatgatcttgatcttatatgccgagcccatcaggtggtagaagatggttat
gagttcttcgcacagaggagattagtcacaatcttctcagctccaaattattgcggggaa
ttcgataatgtaggtgctctgctgagcatagatgaaaacctaatgtgttcatttcaaata
ttgaagccaaatgaaccaggcacaccacgtgtaagaagacaaattccgaataagccagca
attgcggaaagcgcctga
DBGET
integrated database retrieval system
