Lolium rigidum (rigid ryegrass): 124646575
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Entry
124646575 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6-like
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124646575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124646575
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124646575
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
HECT type E3
124646575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
124646575
NCBI-ProteinID:
XP_047042636
LinkDB
All DBs
Position
4:73495253..73508969
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AA seq
1031 aa
AA seq
DB search
MFFSGDPTSRKRVDMGGRSNKERDRQVLLEQTREERRRRLAMRLQNSSATKIQKCFRGKR
AFELARSEVRENFCSTFGEHCQRVDRNCFSANSDFLRQLLFFFNASKDDDIAILSQVCNL
LLQYVKNGDAVSLFAGLNYSSVEPLVIHRVKKLALICVYAVHQKRYDWSNQLLMSVESTE
MPFVRLLEAVTCLLNPKLPWICKVVGYLQHKRIYCLFRGIIIAVPQNARNLEHHHNTSAL
EQALMLVASHVGDDPCCCPIVDPRWSFSSQLLSIPFLWHRLPHFKKVFAANGLSKYYIHQ
IACYLPSRADVLPKDISVNHPGYACVLANVLEAATWILAEPMFASDRAADIIAVSTSLLD
ALPMITSPTERADEDDDMPMDVDVKGGLDIDLQKQITAAFDSNTRLLDHLVNALFRGTLS
TNYSDLSGPSDAEVEAVGSICAFLHVMFNTLPLDVTMTVLAYRTEIVPALWNFIKRCHVN
QRWPYFSKNISPLPADAPGWLLPVSVFCPIYKYMLKIVDNEEFYEQEKPLSLKDLKSLIL
ILKQALWQLLWIIPSHTSSTQKPLPNPLGLKKMSIDNLKSRARTGLSELLIQLQDWNNRL
PFTSDSDFYSQEATSENFVSQAILGNTRASEIIKLAPFLAPFTIRVKIFTSQLANSKQST
TSHSSLTRHRFKIRRSRLLEDAFDQLSLLSEEDLKGPIRVSFVNEHGVEEAGIDGGGIFK
DFMENITRAAFDVQYGLFKETVDHLLYPNPGSGLVHEQHLQYFHFLGSLLGKAMYEGILV
DLPFATFFLSKLKEKSNFLNDLPSLDPELYRHLLFLKHYQGDLSDLELYFVILNNEYGEQ
SEEELLPGGREMRVTNQNVIMFIHLVANHRLNYQIRGQSRHFLRGFQQLVPKEWIDMFNE
HEIQLLISGSVESLDIDDLRLNTNYSGGYHPDHEIIDMLWEVLKSFSSDNQKKFLKFVTG
CSRGPLLGFEYLDPKFCIQRAGVPGVEEHGDRLPTSATCMNLLKLPPYKTKEQLQTKLLY
AINSEAGFDLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggcgacccgacctcgcggaagcgggtcgacatgggcggccggagcaac
aaggagcgcgaccgccaggtgctgctcgagcagacgcgcgaggagcggcgccgccgcctg
gcgatgcgcctacagaactcatccgccaccaagatccagaaatgcttcagagggaagagg
gcattcgaactggcgcgctccgaagttcgagaaaacttctgctctacttttggggagcac
tgccagagggtagataggaactgcttcagcgctaattctgactttcttcgtcaactgctc
ttcttcttcaatgcaagtaaagacgatgatattgctatactttctcaagtctgcaactta
cttctgcagtatgttaaaaatggagatgccgtaagcctcttcgctggtttaaattactcc
tcagtggaacctcttgtgatacatagggtaaaaaaactcgcactcatctgtgtgtatgca
gtccatcagaagaggtatgattggagtaaccaacttttgatgtcagtggaaagcacagaa
atgccctttgtccgattattagaagctgtgacttgtttgttaaatcctaaactaccgtgg
atttgcaaagttgttgggtatcttcagcacaaaaggatctattgcttatttcgggggatt
attattgcagtaccgcaaaatgcaagaaatttggagcaccaccataatacatctgcgctg
gagcaagctctcatgcttgttgcttcgcatgttggcgatgatccatgctgctgtccaatt
gtcgatccaagatggagtttttcctcgcaacttctatccattccttttctctggcatcgt
ttgccgcacttcaagaaggttttcgctgctaatgggctcagcaaatattatatccatcag
atagcttgctatttgcctagtcgtgctgatgttcttccaaaggatatatcagttaatcat
ccaggatatgcttgtgttctagcaaatgtacttgaagctgcaacctggattttggctgaa
ccaatgttcgcttctgatagagcagctgacatcattgctgtttctacgtcattgctggat
gcgttgccaatgatcacatcccctactgaaagagcagatgaggacgatgacatgcccatg
gacgttgatgttaaaggtggtcttgatattgatttgcaaaaacagataactgcagcattt
gattcaaatacacgattactcgatcatttggtgaatgcactgttcagaggcacattaagc
acaaactattctgatctatctggaccatcagatgctgaagtggaagctgtagggtccatt
tgtgctttccttcatgtcatgttcaacacactgcctctagatgtaactatgactgtgctg
gcctaccgtaccgaaattgttcctgcactatggaattttataaagcgatgccatgtaaac
caaagatggccatatttttccaagaatatctctccattgcctgcagatgctcctggttgg
ctactgccagtgtccgtattctgtcccatatacaagtacatgttaaagattgttgataac
gaggaattctatgaacaagagaaacctctttcacttaaggatttgaagtccctgattctc
attttaaagcaggctttatggcaacttctttggattattccttcacacacctcttctact
cagaagccattacctaatcctttaggccttaagaaaatgtcgattgataatctcaagagc
cgggctaggactgggttatctgagttactcatacagttacaagactggaacaaccgactc
ccattcacttccgatagtgatttctattcccaagaagcaacaagcgaaaattttgtctct
caggcaatacttggcaacactcgagcatcagagattataaagcttgccccctttttggcg
ccttttaccatcagagtcaagatatttacttcacaattggcaaattctaaacaatcaacg
acgtcccattcttccttgacaagacaccggttcaagataagaagaagtcgacttctggaa
gatgcttttgaccagctaagcttgctctctgaagaagatcttaaaggaccaattcgagta
tcatttgttaatgagcatggtgtggaagaagctggaattgatggaggcggaattttcaaa
gatttcatggaaaatatcactcgtgctgcgtttgatgtgcagtatggcttgttcaaggaa
acggtcgatcatcttttgtaccccaaccctggatcgggattggttcacgaacagcatctg
cagtatttccattttcttggaagtctcctcgggaaggcgatgtatgagggaatacttgtt
gacttgccatttgctaccttcttcttgagcaagctgaaagagaagtccaacttcttgaat
gatctgccttcactggatccagagttgtatcgacatcttctgtttttgaagcattaccaa
ggcgacctctcagatttggagctgtactttgttattctgaataatgaatatggcgaacaa
tcagaagaagagctgcttcctggtgggagagagatgcgtgttactaatcagaatgttatt
atgtttatccaccttgttgctaaccatcgattaaactatcagattcgtggacaaagtaga
cattttttaagaggttttcaacaacttgtaccgaaggaatggatcgatatgttcaatgaa
catgaaattcagcttctcatatctggttccgtggaaagtttggacattgatgacttgcgt
ttgaacaccaactattccggaggttatcatccggaccatgagatcattgatatgctctgg
gaggttttaaagagcttcagttcagataatcagaaaaagtttctcaagtttgtgactgga
tgttctcgtgggccactccttggatttgagtaccttgatccaaaattttgcattcaaaga
gctggtgtccctggtgtggaggagcatggagaccggttgcccacctcagctacttgcatg
aaccttcttaagctccctccttacaaaaccaaggagcagttgcaaaccaaactgttgtac
gcgataaattcagaagccggtttcgacctgagctaa
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