Lolium rigidum (rigid ryegrass): 124646708
Help
Entry
124646708 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 11
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124646708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124646708
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124646708
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124646708
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
zf-C3HC4
zf-RING_UBOX
PSI_Plexin-B
Motif
Other DBs
NCBI-GeneID:
124646708
NCBI-ProteinID:
XP_047042743
LinkDB
All DBs
Position
4:complement(14539643..14540577)
Genome browser
AA seq
276 aa
AA seq
DB search
MALPAKRKPLENVTVEDADTLDCGICYRPLKPPVFQCAVGHSICSRCRDKLVAAGRSLQC
HVCRVPLIGGYQRCIALEKVLDSIRLPCENAAHGCDVRPAHYDHGEHARECPHKPCYCPA
DACGFAGSTAALLGHMAAAHGWPCTTDTRPWVCVKVNLRDGFNAVSVHASGQQHLFLLNV
ARSPFGRAISVSCVHPHQTVGFEVRLKYSRNENAHAGGVCRGHSQQSQFTVACTDLSGGP
PSSDESFQFFLPKCVHPDFIRTIAATFEVLHVTISV
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcactgccggcgaagcggaagccgctcgagaacgtgacggtggaggacgccgatacc
ctcgactgcggcatctgctatcgccctctcaagccgccagtcttccagtgcgccgtcggc
cactccatatgctcgcggtgccgcgacaagctggtggctgcggggcggagcctgcagtgc
cacgtgtgccgcgtcccactgatcggcggctatcagcggtgcatcgccctggagaaggtg
ctggactccatccgtttgccgtgcgagaacgccgcccacggctgcgacgtcaggccggcg
cactacgaccacggcgagcacgcaagggagtgcccccacaagccgtgctactgcccggcg
gacgcgtgcggcttcgccggctccacggcggcgctactgggccacatggcggccgcgcac
gggtggccgtgcacgacggacacccggccgtgggtgtgcgtcaaggtgaacctccgcgac
ggcttcaacgccgtctccgtccacgccagcgggcagcagcacctgttcctgctgaatgtg
gcgcggagcccgttcgggcgcgcgatctccgtctcgtgcgtgcatcctcatcagaccgtg
gggttcgaggtgcggctcaagtactctcgcaacgaaaacgcccatgccggcggcgtctgc
cgcgggcatagccagcagagtcagttcaccgtggcgtgcactgacctctccggtgggccg
cccagctccgacgagtccttccagttcttcctgcccaagtgcgttcatccggatttcatc
cggactatcgctgccactttcgaagttctgcatgtcaccattagtgtatga
DBGET
integrated database retrieval system
