Lolium rigidum (rigid ryegrass): 124646715
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Entry
124646715 CDS
T09103
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124646715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124646715
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124646715
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_4
F-box_5
LRR_8
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
124646715
NCBI-ProteinID:
XP_047042750
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Position
4:15595073..15599918
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AA seq
586 aa
AA seq
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MGRAGGPAAPPWHSLPDEVWEHAFSFLPADADRGAAACACHGWLRAERRSRRRLVVPNCY
ATDPRDAVDRFPSVRAAEVKGKPHFADFGLLPPSWGAYAAPWVAAAADGWPLLEELSFKR
MFVTDECLEMIASSFRNFQVLRLNSCEGFTTAGLAAITEGCRNLKELDLQENYIDDCSSH
WLSNFPECYTSLEALNFSCLHGEVNFTVLERLVSRCRNLKTLKLNNAIPLDNVASLLRKA
PQIIELGTGKFSADYHPDLFAKVEAAFAGCTSLRRLSGTWDAVPDYLPAFYCVCEGLTSL
NLSYATVQGPELIKFISRCKNLLQLWVMDLIEDHGLSVVASSCSKLQELRVFPSDPFGHN
GGQVFLTERGLVDVSASCPKLESVLYFCSRMTNEALVMIAKNRPNFTCFRLALLEPRSPD
YITRQPLDAGFSAIVESCKGLRRLSMSGLLTDLVFKSIGAHADRLEMLSLAFAGDSDLGL
NDILSGCKSLKKLEIRDCPFGDKALLANAAKLETMRSLWMNSCSLTVGGCRLLALKMPHL
TVEIINDPGETCPVESLPFDSPVEKLYVYRTLAGPRSDTPDCVQIV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgccggcggccccgccgcgcccccgtggcactcgctcccggacgaggtctgg
gagcacgccttctccttcctccccgccgacgccgaccgcggcgccgccgcctgcgcctgc
cacggctggctccgcgccgagcgccgctcccgccgccgcctcgtcgtgcccaactgctac
gccaccgacccgcgcgacgccgtcgacaggttcccctccgtccgcgccgcagaggtcaag
ggcaagccgcacttcgccgacttcggcctcctgccgccctcatggggcgcctatgccgcg
ccctgggtcgccgccgcagccgacggatggccgctgctcgaggagcttagcttcaagcgc
atgttcgtcaccgacgagtgccttgagatgatcgcgtcatccttcaggaacttccaggtc
ctgcgactaaactcttgcgagggattcaccaccgccggactcgccgccattacggaaggc
tgcagaaatttaaaagaacttgacctgcaagagaactacattgatgattgttcaagtcat
tggctcagcaactttccagaatgctatacttctctggaagctctgaatttttcatgctta
cacggggaggtcaatttcactgtacttgagaggctagtaagcagatgccgcaacctcaag
actctgaagctcaacaatgcaatccctcttgacaatgttgctagcctgcttcgtaaggct
ccgcaaataatagaactcggaactggcaaattctctgctgactatcatccagatcttttt
gcaaaggttgaagcagcatttgcaggttgtacaagccttagaaggctttctgggacttgg
gacgctgttccagattacctgccagcattctattgtgtatgtgaaggcctcacatctctt
aatctgagttatgccaccgtgcaaggccctgagctcatcaaattcattagcagatgcaag
aatctgctgcagttatgggtgatggacctcattgaggaccatggtctatctgttgtggca
tcaagttgcagtaaactgcaagagttgcgggtcttcccttccgatccttttggtcataac
ggcgggcaagttttcttgacagaaagaggccttgttgatgtttctgccagttgtcccaaa
ttggagtcagttctttacttctgcagccggatgacgaatgaggctcttgttatgattgca
aagaaccgtccaaacttcacttgcttccgcttagccctccttgagccccgttctccggat
tacatcacacggcagcctcttgatgctggtttcagtgccattgttgaatcatgcaagggg
cttaggcgcctctctatgtctggtcttctcacagatcttgtattcaaatcaatcggtgca
catgctgatcgtcttgagatgctatcactcgcatttgctggagacagcgatctaggcctg
aatgacatcctctctggctgcaagagcctgaagaagctagagatcagggactgcccgttt
ggggataaagcgttgctggcaaatgctgccaagctggagacaatgcgatccctttggatg
aactcgtgctcgttgaccgtgggcgggtgccgactgcttgcactcaagatgcctcacctt
actgtggagataataaacgatcctggagagacatgtccagtggagtcactcccgtttgat
agccctgtcgagaaattgtatgtctaccggactcttgcaggtccaagatctgacacaccg
gactgtgtccagattgtttag
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