Lolium rigidum (rigid ryegrass): 124646733
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Entry
124646733 CDS
T09103
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03082
ATP-dependent chromatin remodeling
lrd03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124646733
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124646733
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124646733
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124646733
03036 Chromosome and associated proteins [BR:
lrd03036
]
124646733
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124646733
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124646733
SWI/SNF complex
124646733
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124646733
PBAF complex
124646733
SWI/SNF complex
124646733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
GP70
Motif
Other DBs
NCBI-GeneID:
124646733
NCBI-ProteinID:
XP_047042766
LinkDB
All DBs
Position
4:19077414..19080512
Genome browser
AA seq
238 aa
AA seq
DB search
MKTVSMGAPRSSTVKFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPRDPDTEIMSFAKRT
AKDLKLPTSFVPQMFHSIQGQLADFRSYEGQDMQVKEKIVPLKIDLRVNNTVVRDQFLWD
IGNLESDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIASQSVSAMREAKMSKKRRA
PEFASNSKAMNNAVDMFKYFGSKGSVIRKRKEWYLYAPVVDVISNEKTVVVAKDEAKL
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtgagcatgggcgcccccaggtcctccaccgtcaagttccgcatgccgacg
agggacaacctggtgccgatacgcgtcgacgtcgaggtggacggccagcgctacagggac
gccttcacctggaaccctcgcgatcccgacacagagatcatgagcttcgccaagaggacg
gccaaggacctgaagctgccgaccagcttcgtcccccagatgttccactccatccagggg
caattggccgactttcgttcctacgaggggcaggatatgcaggtcaaagagaagattgtg
cccctcaagattgacctccgggtgaacaacactgtagtgagagaccagttcttgtgggat
ataggcaaccttgaaagcgatcctgaggaatttgcaaggaccttatgcgatgatttgaac
attacagatcctgaagttgggcctgctattgctgtttccatccgcgagcagctttatgag
attgctagtcagagtgtttcagctatgagagaagctaaaatgtcaaagaagaggcgagca
ccggaatttgcttcaaatagtaaagctatgaataacgcagtggacatgttcaagtatttt
ggaagcaaagggagcgtcatccggaaaaggaaggagtggtacctgtatgcgcctgttgtt
gatgttatttctaacgagaaaactgtagttgttgcaaaggatgaagctaaactctag
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