Lolium rigidum (rigid ryegrass): 124646802
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Entry
124646802 CDS
T09103
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex-like
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124646802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124646802
03036 Chromosome and associated proteins [BR:
lrd03036
]
124646802
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
124646802
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
124646802
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
DSE1_N
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_NOL10_N
Beta-prop_VPS8
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Ge1_WD40
ASA1
RMC1_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
124646802
NCBI-ProteinID:
XP_047042845
LinkDB
All DBs
Position
1:complement(105980594..105983196)
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AA seq
468 aa
AA seq
DB search
MDAGADPMTPVKAAPRAASRSPLREAGASPYMPSLRTAAGSPAIKCYGDRFIPCRGTEED
RDIARYLLTEKENAATAPSPSKGAYRELLAKKMLGNRTRIFSFRNKPPPQPDSLLANDAA
SIHANPARKRRCIPQTPDRILDAPDLADDYRVNLLDWGCRNVLSIALGNRICLLDVSSGS
ISELATVHEDDGPVTSVSWAPDGRHIAVGLASSVVQLWDSTSSQLLRTLEGVHESGVGSL
AWRDNKVLTSGDIYGKIVNNDMRIRNHAAQTYCGHTKEVCGLKWSGSGKQLASGGNDDLL
FLWDVAMASSVGSPGRRTQWLHRLEDHLAAVRGLAWCPFQSNMLASGGGTNDRCIKFWNT
NTGACLNSVNTGAQVCALLWSKNDRELLSSHGYDQNELTLWKYPAMVKMAELTGHTSRVL
FMSQSPDGCTVASAAADERLCFWNVFGTSKDAVKSSHTRMFNSYNHLR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggatgccggagccgacccgatgacgccggtgaaggccgcgccgcgtgcggcgtcgcgg
tcgccgctccgggaggccggcgcgagcccctacatgccgtcactgcgcacggcggccggc
agccctgccatcaagtgctacggtgaccggttcataccgtgcagaggaacagaggaggac
agggacatcgcgcgctacctcctgacggagaaggagaacgccgccacggcgccgtcgcct
tccaagggagcgtaccgcgagctgctggccaagaagatgctcggcaaccggaccagaatc
ttctccttccggaacaagccgccaccacagcccgacagcctccttgccaatgatgcagct
tccatccacgccaatccggccaggaagcgccgatgcatccctcagactccggatagaatt
ctggatgcaccagacctcgcagacgattaccgtgtcaatttgctggactggggatgtcgc
aacgtgctgtccatcgcgctgggaaacaggatatgcctcttggacgtctcgagtgggtcc
atatctgagctcgccaccgttcacgaagacgatggccctgtcactagtgtcagctgggct
cctgatggccgtcacattgctgttggcctcgcgtcttcagttgtccagctctgggattca
acctctagccaactgcttaggacactggaaggtgtgcacgagtcgggagtcggttcactg
gcatggagagacaacaaagtcctgacctctggtgatatctacggcaagattgtgaacaat
gacatgaggatcaggaaccatgccgcgcagacatactgtgggcacaccaaggaggtgtgc
gggctcaagtggtcggggtcaggaaagcagctggccagtggcggcaacgatgacctcctc
ttcttgtgggatgtcgccatggcatcctcagtagggtctccaggccgtcgcacccaatgg
ctacacaggcttgaggaccacttggctgccgtgagggggctcgcatggtgcccattccag
agcaacatgctggcatcaggtggtggcacaaacgatcggtgcatcaagttttggaacaca
aacacaggtgcatgcctcaactctgtcaacaccggggcacaggtgtgtgcgctgctctgg
agcaagaatgacagagagctgctgagctcacatggatacgatcagaatgagctcaccttg
tggaagtacccggcgatggttaagatggctgaactcactggccatacttcccgtgtcctt
ttcatgtcccagagccctgatggttgcacagtagcatctgctgccgcagatgagagactg
tgtttctggaacgtctttgggacttctaaggatgcagtcaagagttctcacactaggatg
ttcaacagttacaatcatctccgataa
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