Lolium rigidum (rigid ryegrass): 124646821
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Entry
124646821 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124646821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124646821
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124646821
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
HECT type E3
124646821
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
HEAT
Arm
Motif
Other DBs
NCBI-GeneID:
124646821
NCBI-ProteinID:
XP_047042830
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All DBs
Position
4:29293247..29299385
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AA seq
1329 aa
AA seq
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MADVLAYLPYVVPALADKDHGADGHLAALETLCVALPYAYPDLLIDVDKVGCFVTRLPAL
VSAAGADQGNMAVLAAQAIAGVVEQLPEWAESFEKNGAVQALRDRMLAVDNMELAEKCLL
ALKLICEECPHQCLRHGVAAAVLQFFDFFPTNEQKVALKIVAEIVEECDEADVPKAMEAA
PALCNLLQSSDNTIQKSALSCLCMIASNAHGKAEHMDMLCELKVVDTAMRMLEKDGWKTI
GDENLTGILGLLKNISSASAKAVKSLFDLGVCDLLKQMITYYSSSQSNSDKLQMLVELIN
QLMRPLETSDALKNAIVEQNPYLDQLSSIVTLLIQVAKCGALSSVCYTCIVLIGNIVEVS
TPAFLIELQKTANLSSFLMCLLARKKRHVVFETLKISKSLLKKQHQFFFESFDKEGVKHA
IDAIQAQEKDRNSNHKLKMKNKMQEHCVCFNLDSDASSTDRCKIENNAILNLAEEIKKSF
SVVKASNKSPYRLGCFTTFVKGYFAKLNGHTMTTPTQNLDRCRELSEVSRRLLSDKLPST
STFVFAKSGSAKDLSDYLCNVAYLKPNLNNRQYLLERAKEVQCRLQKFAHLALEMSNESS
VKPLEILVEKLLDSLHMSYDSFPVILSHHKQSTRESTMIPLRHSGIEDSESLHIKFVKAR
REKELQGYGGVLPIPISSKPDAIEADLWPNICSPRNRQGSSRLMFSYKGIQLKSSATIFE
SLVHLMNEGKSDITLDQSFWKEVHRISYKRNKNKKISTLSSSDARLSAVHEKLEQSLPKD
PFFSAMFLGKLPGDVDESDPSYNLLFTLKILEGLNRFSYQLSMDEKIRLFAESCLRDLDD
IKVTISPIPQHQFTSILLTSKLELQMQESLFEVGLVPSWCVYLVETCPFLFSFNARWKYF
CLTLHRSFMGDDTSDPDSPNEEDEASDASNEAANKTKKYKVTRGNILESAISMMAKHGSS
TKTIEVAFEGEAGTGRGPTIEFYSTVSHELQRFGLGMWRGDNARKAEGETGFVHSSFGLF
PQPWSSEVTSSRGIEFSDVVQKFKLLGHIVARAVLDGRILDISLSKAFYKIILGQELDIY
DIPSFDPELGKTVVEFQALAKRKKFLESSSETTSNPSADLSYKNVRLEDLCLDFTLPGNP
EYELVPGGSDKMVTLESLEEYVYLIVDATLKSGIAKQIEAFKSAFNEVFALKTLRMFNEE
EMERILCGEHDAWASSKLADHIEFDHGYDAHSPPVVNFLEILREFGREEQRAFIQFSTGA
PTLPLGGLASLNPKLTVVRKQCDGCVDGELPSVNTCRHFIKLPPYSSKEIMREKLKYALA
EGLGSFHLS
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggcgtacctgccgtacgtggtgccggcgctggcggacaaggaccat
ggcgccgacgggcacctggcggcgctggaaacgctctgcgtcgcgctgccctacgcctac
ccggaccttctcatcgacgtcgataaggtcggctgcttcgtgacgcgcctcccggccctc
gtctctgccgccggcgccgaccagggcaacatggccgtcctggccgcgcaggccatcgcc
ggggtcgtcgagcagctgccggagtgggcggagagcttcgagaagaacggcgccgttcag
gcgctccgggaccgcatgctcgccgtcgacaacatggagctcgccgagaagtgcctgtta
gctctgaagctaatatgcgaggaatgcccgcaccagtgcctccgccacggcgtcgccgcg
gccgtgctgcagttcttcgacttcttccccaccaatgagcagaaagtggcgctcaagatc
gtcgccgaaatcgtcgaagaatgcgacgaggcggacgtgcccaaggctatggaggccgct
ccagcgctctgcaacctcctgcagtcatctgacaatacgatacaaaagtcggccctttct
tgcctgtgtatgatcgcctccaatgctcacggcaaggcagaacacatggatatgctttgc
gagttgaaggtggtcgacacggccatgaggatgctggagaaggatgggtggaagaccatc
ggtgatgagaatttaactggcatccttgggctgctaaaaaatatttcttcagcctcagca
aaggctgtgaagtcccttttcgacttgggagtttgcgatttgctcaagcagatgataact
tattacagctcctcgcagagtaacagtgacaagttgcagatgcttgtggagctcatcaat
cagcttatgcggcctcttgagacatccgacgctctaaagaatgccatcgtagaacaaaat
ccataccttgaccagctttctagcattgtgacacttctaatacaggttgcaaaatgtggt
gcactatcatcagtttgctacacatgcattgtcctcatcggcaacattgttgaagtaagc
acacctgctttcctgattgagttacagaagactgcaaatctctcgagctttcttatgtgc
ttgttggctcggaagaagcgccatgtcgtgttcgaaacgctcaaaatttcaaagagcctc
ctgaaaaaacagcatcagtttttctttgagagctttgacaaggagggtgtgaagcatgcg
attgatgccatacaagcacaagaaaaagatagaaactccaatcacaagttgaaaatgaaa
aacaagatgcaagaacattgtgtttgcttcaatttagactcagatgcatcttcgacagat
aggtgcaagattgagaataatgctatcctgaatctagcagaagagataaagaaaagcttc
tctgtggtgaaagcaagtaacaaatctccatacaggttgggatgctttactacattcgtc
aaaggatattttgctaagttgaatggccatacaatgacaacccccacacagaatttggat
cgatgcagagagttgtctgaagtttcgaggagattattatcggataaacttccaagtacc
tctacttttgtgtttgcgaagagcggatcagccaaagatttatcagattatctctgcaat
gtggcatacttgaaaccaaatctcaataatcgccagtacttattagagcgggctaaggag
gtgcaatgtcgactgcagaaatttgctcatttggctctcgagatgtccaatgaaagctct
gtgaagccccttgagattttggtggagaagctcctagactctctgcacatgtcttatgac
agttttcctgtcatattatctcatcataaacagtctactcgtgagagcacgatgattcct
ctgaggcattcaggaatcgaggattcagaatcactgcatataaaatttgtgaaggcacgc
agagagaaagagttgcaaggttatggcggtgttctccctattcctatttcttcaaagcca
gatgcaattgaagcagacctttggcctaatatttgctctccacggaatcggcagggatcc
tcaagattgatgttctcttacaaaggcatacaactcaagtcatctgcaacgatttttgag
tcacttgtccatttaatgaacgagggaaaatctgatataacgcttgaccaatctttctgg
aaagaagtacacagaatatcgtataagagaaacaaaaacaagaaaatctctactttgagc
tcctctgatgctcggttatctgctgtgcatgaaaagcttgaacaatcactgccgaaggac
ccatttttcagtgccatgttccttgggaagcttcctggtgatgtggatgaatctgatcca
tcctacaacttgttgttcacgctgaaaattcttgaagggcttaaccgtttttcataccaa
ctgtcaatggatgagaagatacgcttatttgcagaaagctgcctacgagatttggatgat
attaaggtgacaatctctccaatcccacagcatcagttcacaagtatccttctgaccagt
aagctggagctgcaaatgcaagagagcttgtttgaggttgggctggtaccctcatggtgt
gtctatctggtggaaacttgccccttcttattctccttcaatgcacggtggaagtacttc
tgcctgactctgcatcgctcattcatgggagatgacacaagtgatccagattcaccaaac
gaggaagatgaggcaagtgatgcttcaaacgaggctgctaataaaaccaagaagtacaaa
gtaacacgaggtaacattcttgaaagtgctatatcaatgatggccaaacatgggtcaagc
accaaaaccattgaggtggcatttgaaggagaggctgggactgggcgaggcccaaccatc
gaattttactctacagttagccatgagcttcagaggtttgggcttgggatgtggagaggt
gataatgctagaaaagcagaaggagaaactggattcgttcattctagttttgggctcttt
ccacagccatggtcctcagaggtcacttcatcaagagggatcgaattctctgacgtggta
cagaaattcaagcttcttggacatattgtagcgagagcggttctcgatggaaggatcttg
gacatctcgctctcaaaagcattctacaagatcattcttggacaggagcttgatatctac
gacatcccatcatttgatcctgagctgggcaagactgtagtagagtttcaagccctggct
aaaaggaagaagttcttggagtcatcttcagaaacgacatccaatccctctgcagatttg
tcatataaaaatgtgagattggaagatctgtgccttgattttactcttcctggaaaccca
gaatatgagcttgttcctggaggctcagacaagatggtcacacttgagagtttggaggag
tatgtatatttgatagttgatgcaaccttgaagagtgggattgccaaacagatagaagct
ttcaagtctgcatttaacgaggtttttgctcttaagacccttagaatgttcaacgaggag
gagatggagcgcatactttgtggtgaacatgatgcttgggcttcaagcaaacttgcagat
cacatcgagtttgatcatggctatgatgcacacagtccaccagttgttaacttcctggag
atcctaagggagttcggaagagaagagcagcgggcgttcatccaattctcgactggtgct
cctacgctcccacttggcggcctagcttcactcaatccaaagctcaccgttgtgcgaaag
caatgtgatggctgtgtcgatggtgaactgccaagtgtcaatacctgcaggcacttcatc
aagcttcctccttactcctccaaggagataatgagagagaagctcaaatacgctctggcc
gagggtctaggctccttccatttgtcatga
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