Lolium rigidum (rigid ryegrass): 124647203
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Entry
124647203 CDS
T09103
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124647203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124647203
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124647203
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
F-box_5
LRR_4
LRR_8
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
124647203
NCBI-ProteinID:
XP_047043131
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Position
4:68085321..68091530
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AA seq
586 aa
AA seq
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MGRAGGPAAPPWHSLPDEVWEHAFSFLPADADRGAAACACHGWLRAERRSRRRLVVPNCY
ATDPRDAVDRFPSVRAAEVKGKPHFADFGLLPPSWGAYAAPWVAAAADGWPLLEELSFKR
MFVTDECLEMIASSFRNFKVLRLNSCEGFTTAGLAAITEGCRNLKELDLQENYIDDCSSH
WLSNFPECYTSLEALNFSCLHGEVNFTVLERLVSRCRNLKTLKLNNAIPLDNVASLLRKA
PQIIELGTGKFSADYHPDLFAKVEAAFAGCTSLRRLSGTWDAVPDYLPAFYCVCEGLTSL
NLSYATVQGPELIKFISRCKNLLQLWVMDLIEDHGLSVVASSCSKLQELRVFPSDPFGHN
GGQVFLTERGLVDVSASCPKLESVLYFCSRMTNEALVMIAKNRPNFTCFRLALLEPRSPD
YITRQPLDAGFSAIVESCKGLRRLSMSGLLTDLVFKSIGAHADRLEMLSLAFAGDSDLGL
NDILSGCKSLKKLEIRDCPFGDKALLANAAKLETMRSLWMNSCLLTVGGCRLLALKMPHL
TVEIINDPGETCPVESLPFDSPVEKLYVYRTLAGPRSDTPDCVQIV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgccggcggccccgccgcgcccccgtggcactcgctcccggacgaggtctgg
gagcacgccttctccttcctccccgccgacgccgaccgcggcgccgccgcctgcgcctgc
cacggctggctccgcgccgagcgccgctcccgccgccgcctcgtcgtgcccaactgctac
gccaccgacccgcgcgacgccgtcgacaggttcccctccgtccgcgccgccgaggtcaag
ggcaagccgcacttcgccgacttcggcctcctgccgccctcatggggcgcctatgccgcg
ccctgggtcgccgccgccgccgacggctggccgctgctcgaggagcttagcttcaagcgc
atgttcgtcaccgacgagtgccttgagatgatcgcgtcatccttcaggaacttcaaggtc
ctgcggctaaactcgtgcgagggattcaccaccgccggcctcgccgccattaccgaaggc
tgcagaaatttaaaagaacttgacctgcaagagaactacatcgatgattgttcaagtcat
tggctcagcaactttccagaatgttatacttctctggaagctctgaatttttcatgctta
catggggaggtcaatttcactgtacttgagaggctagtaagcagatgccgcaacctcaag
actctgaagctcaacaatgcaatccctcttgacaatgttgctagcctgcttcgtaaggct
ccgcaaataatagaactcggaactggcaaattctctgctgactatcatccagatcttttt
gcaaaggttgaagcagcatttgcaggttgtacaagccttagaaggctttctgggacttgg
gatgctgttccagattacctgccagcattctattgtgtatgtgaaggcctcacatctctt
aatctgagttatgccaccgtgcaaggccctgagctcatcaaattcattagcagatgcaag
aatctgctgcagttatgggtgatggacctcattgaggaccatggtctatctgttgtggca
tcaagttgcagtaaactgcaagagttgcgggtctttccttccgatccttttggtcataac
ggcgggcaagttttcttgacagaaagaggtcttgttgatgtttctgccagttgtcccaaa
ttggagtcagttctttacttctgcagccggatgacgaatgaggctcttgttatgattgca
aagaaccgtccaaacttcacttgcttccgcttagccctccttgagccccgttctccggat
tacatcacacggcagcctcttgatgctggtttcagtgccattgttgaatcatgcaagggg
cttaggcgcctctctatgtctggtcttctcacagatcttgtattcaaatcaatcggtgca
catgctgatcgtcttgagatgctatcacttgcatttgctggagacagcgatctaggcctg
aatgacatcctctctggctgcaagagcctgaagaagctagagatcagggactgcccgttt
ggggataaagcgttgctggcaaatgctgccaagctggagacaatgcgatccctttggatg
aactcgtgcttgttgaccgtgggcgggtgccgactgcttgcactcaagatgcctcacctt
actgtggagataataaacgatcctggagagacatgtccagtggagtcactcccgtttgat
agccctgtcgagaaattgtatgtctaccggacacttgcaggtccaagatctgacacacca
gactgtgtccagattgtttag
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