Lolium rigidum (rigid ryegrass): 124647214
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Entry
124647214 CDS
T09103
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124647214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124647214
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124647214
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124647214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4729
zf-RING_5
GBD_ELAPOR1-like_3rd
Motif
Other DBs
NCBI-GeneID:
124647214
NCBI-ProteinID:
XP_047043139
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All DBs
Position
4:69920930..69921850
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AA seq
282 aa
AA seq
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MAPASTRATAALDDVTLDNTDALDCGLCCLPLKPPIFQCKVGHVVCSPCRDKLGAARRCH
VCRTATSGGYHRNHDMEKLLESIRVPCSNAAYGCAAKPVYYDRGIHLRSCQHAPCHCPLK
ACGFAGSTSALMDHFAAVHTWPSTTELRSWKPVQVHLREGFNVTSLRTGRQHYLFLITVA
RKQFGTAISVFCVHPQEPVVDGEPPPTPRTVGFEVRLKYSRRNYGSGDMCRGHTQETKFK
VAFTDLSNGLPDSDDACHFFLPKLVHPFDIETITAEFDVGTV
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggcgtctacacgcgcgacagcggcactcgacgacgtgactttagacaacacc
gacgccctcgactgcggcctttgctgcctaccactcaagccgcccatcttccagtgtaag
gtggggcacgtggtatgctcgccgtgccgagacaagctgggggcggctcggaggtgccat
gtgtgtcgcacggcgacttccggcggataccatcggaaccacgacatggagaagctgctg
gagtcgattcgggtgccttgctccaacgccgcctacggctgtgccgccaagccggtctac
tacgacaggggcatccacctccggtcgtgccagcacgcgccctgccactgtccgctcaaa
gcctgcggcttcgccggctccacctcggcgctcatggaccacttcgccgccgtgcacacg
tggccgtcgacgactgagcttcgctcctggaagcccgtccaggtgcacctccgcgagggc
ttcaacgtcacctccctccgcaccggcaggcaacactacctgttcctgataaccgttgcg
cggaaacagtttggaaccgctatctccgtcttctgcgtacatcctcaggaaccagtggtc
gacggcgagccaccgccgacgccaagaactgtgggattcgaggtcaggctcaaatactct
cgccgcaactacggcagcggtgatatgtgccgcggccatacccaggaaaccaagtttaaa
gtagccttcaccgacctctccaatgggctgcctgactcagatgacgcttgccacttcttc
ctgcccaagctcgttcatccctttgacatcgagactatcaccgccgaattcgatgtaggg
acagtatga
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