Lolium rigidum (rigid ryegrass): 124647412
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Entry
124647412 CDS
T09103
Name
(RefSeq) probable C-terminal domain small phosphatase
KO
K15731
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:
3.1.3.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124647412
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124647412
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124647412
Protein phosphatases and associated proteins [BR:
lrd01009
]
HAD phosphatases
Fcp/Scp phosphatases
124647412
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124647412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
HAD
Motif
Other DBs
NCBI-GeneID:
124647412
NCBI-ProteinID:
XP_047043318
LinkDB
All DBs
Position
4:complement(108932169..108933110)
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AA seq
313 aa
AA seq
DB search
MVSRTPTKAPAPRPSPAKPSPSPATRRRQAFRAGRRLSATKRRASPLKSLAAAPAAVASS
FDRSVRFCRRRLFKLFARLAVFGSPTKRRAAAAGFQRLRSTSAPPPTPSVVSSPRSQRPG
KVHPAALPPPTDPTKKTLFLDLDETLIHSQTDPVPDLYDFTVHPVICGQAITFYVRKRPG
VDAFLHAAADAFEVVVFTAGLEQYASLVLDRLDPAGDLIAHRLYRGACRDGGDGRLVKDL
SATGRPLGCAIIVDDNPNAYALQPENALPVVPFIDDDDDKELQKVMGFLDVAAGFDDTRD
ALRCYKDLLVKAK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccaggacgcccacaaaggcaccggcgccgaggcccagccccgcgaagccgtcg
ccgtcgccagcgaccaggcgccgccaggccttccgtgccggtcgccgcctgtccgccacc
aagcgtcgggcgtccccgctcaagtccctggcggccgcccccgccgccgtcgcctcctcc
ttcgaccgctccgtgcgcttctgccgccgccgcctcttcaagctcttcgcccgcctcgcc
gtcttcggctccccgaccaagcgtcgggcggcggccgcggggttccagcgcctccgctcc
acctccgcccctcccccaaccccctccgtagtctcctccccccgctcccaacgcccgggc
aaggtccaccccgccgcgctcccgccgccgaccgatccaacaaaaaagaccctcttcctc
gacctcgacgagacgctcatccactcgcagaccgaccccgtgccagacctgtacgatttc
accgtccaccccgtcatctgcggccaggccatcaccttctacgtgcgcaagcgcccaggc
gtcgacgccttcctccacgccgccgcggacgccttcgaggtcgtcgtcttcaccgcgggg
ctggagcagtacgcctcgctcgtgctcgaccgcctcgaccccgccggcgacctcatcgcg
caccgcctctaccgcggcgcctgccgcgacggcggggacggcaggctcgtcaaggacctc
tcggccaccggccggcctctcggatgcgccatcatcgtcgacgacaaccccaacgcctac
gctctgcagccggagaacgccctccccgtggtgcccttcatcgacgacgacgatgacaag
gagctgcagaaggtcatggggtttctggacgtcgccgcagggttcgacgacacccgggac
gccctcaggtgctacaaggatctcctcgtcaaggccaagtga
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