Lolium rigidum (rigid ryegrass): 124647577
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Entry
124647577 CDS
T09103
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1-like
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124647577
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lrd01007
]
124647577
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124647577
Enzymes [BR:
lrd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
124647577
Amino acid related enzymes [BR:
lrd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124647577
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124647577
Prokaryotic type
124647577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
124647577
NCBI-ProteinID:
XP_047043453
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All DBs
Position
4:142189360..142200395
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AA seq
1119 aa
AA seq
DB search
MNNGKKPELVTASGYPLHKGASDRRVWSATGQCVPTGHRQPTGGRPTHTHTPAPAGCRGD
RGGRGGGELAPEGAILAMEQPLDEKDLERKLKKEHKAKEKEEKKLRAKQKEAARLQAQAA
SDGARRSEKKQKRKGAIDENPEDFVDPDTPTGQKKLLSSQMAKQYSPSAVEKSWYNWWES
SQYFEADAASSKPPFVIVLPPPNVTGALHIGHAITVAIEDAMIRWRRMSGYNTLWVPGMD
HAGIATQVVVERKLMRERKLSRHDLGREKFLSEVNNWKDQYGGTILRQLRMLGASLDWSR
ECFTMDSQRSKAVTEAFVKLYKEGLIYRDIRIGHWDCTLRTAVSDIEVDYLELKEETLLV
VPGYNIPVQFGVLISFAYPLEEGLGEIIVATTRIETMFGDTAIAVHSQDERYKHLHGKYA
IHPFNGRKLEIICDDELVKTSFGTGAVKITPAHDTEDFKAGKRHNLDFINIFTDDGNINE
NGGSQFEGMPRFTARAAVIDALKAKGLYRGMKNNEMKLGRCSRTNDIVEPMIKPQWFVNC
NTMAKAALDAVKSKEIEIIPPQYEQDWYRWLENIRDWCISRQLWWGHRVPAWYVTLEDDE
EKDMGSYIDHWIIARNENDAILEAEERYPAKKYQLDQDPDVLDTWFSSSLFPLSIFGWPD
DTADLSTFYPTSVLETGLDILFFWVARMVMLGILLGGDVPFQKIYLHPIIRDAHGRKMSK
SLGNVIDPIDVINGITLEGLQKKLEQGNLDPDELEKAKEGLKKDFPDGIPECGTDALRFA
LISYTSQSDKINLDIKRVHGYRQWCNKLWNAIRFAMIKLGDQYTPPTTVVVDSMPPVCRW
ILSVLNKSVGKTVSSLEAYKFSEATSSIYSWWQYQLCDVFIEAIKPYFNDSQEFEAARGA
SRDTLWLCLNTGLRLLHPFMPYVTEELWQRLPQPKEACRKDSIMISEYPSTVQEWENDQV
ENEMEIVLDAVSKLRSLRPPTDIHERRPSFVLCRNQEIAATVQYYQAQIATLASVSSLKI
LIGDDPSPPGCATNIVNKDLAVYLQLRGALNAEAEHEKLRKRREEVQKQHDTLSQKMNAS
GYREKAPQSKQDDDMKKLASLLEELEIISEAESKLDANN
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatgggaagaaaccagagctggtgacggcgtcggggtatcctttacataaaggt
gcaagcgatcgtagggtctggtccgcgacgggtcagtgcgtgccaaccgggcaccggcaa
ccgaccggcggccgccccacccacacccacacccctgcgccggccggctgccgtggcgat
cgaggcggtcgcggcggcggagagctcgcgcccgagggcgcgatcctcgccatggagcag
ccgctcgatgagaaggatttggaaaggaagctgaagaaagaacacaaggccaaagagaag
gaggagaagaaactcagggcgaagcagaaggaggcagctaggctccaggcccaagcagca
tctgatggagctaggagaagtgagaagaagcagaagaggaaaggtgccatcgatgagaat
cccgaggatttcgttgacccggatactcctactggacagaagaagctgctttcttctcag
atggccaaacaatatagcccgtcagctgtcgagaaatcatggtacaattggtgggaatca
tcacagtattttgaagcagacgcggcaagctcaaagccaccgttcgtgatagtcttgcca
cccccaaatgtaactggggcccttcacataggccatgcaattacagtggctattgaggat
gctatgattcgctggcggaggatgtcaggttataatactttgtgggttcctggaatggac
catgctggcatagctacacaggtggtggtggaaaggaagctcatgcgtgagagaaagctg
tcaaggcatgatctagggcgtgagaaatttctatctgaggtcaacaactggaaagatcag
tatggtggcacaatattgagacaattacgtatgcttggagcctcgcttgattggtcacgt
gaatgttttacaatggattcacagagatcaaaagctgtaacagaagcttttgtcaagctc
tacaaggaaggtttaatatatagggatatccggattgggcattgggattgcacacttcgt
acagcagtctctgatattgaggttgactatttggaacttaaggaagagactctgttagtg
gtccctggttataacatcccagttcagtttggtgttttgatatcttttgcctatcctctg
gaagaagggttgggtgagattatcgttgcaacaacaagaatagaaacaatgtttggtgat
accgctatagctgttcattctcaggacgaaagatataagcatttgcatggaaaatatgcc
atccatccttttaatggcagaaaacttgaaataatttgtgacgatgagttagtgaaaacc
agttttggtactggtgctgtaaagatcacaccagctcatgataccgaggacttcaaagct
gggaaacggcataaccttgactttatcaatattttcactgacgatgggaacataaatgaa
aatggaggttcacaatttgaaggaatgccacgtttcactgctcgagctgctgttattgat
gcactgaaggcaaagggtctatacagaggcatgaaaaataacgagatgaaattgggccgt
tgttcaagaactaatgatatcgtggagccaatgatcaagccccaatggtttgttaattgt
aatacaatggcaaaggcagctctcgatgctgtgaaatccaaagagatcgagatcattcca
ccacaatatgagcaagactggtacagatggcttgaaaacattcgcgattggtgtatttcg
aggcaactttggtggggacaccgtgtgcctgcttggtatgtaacattagaagatgacgaa
gagaaagacatgggttcatacattgaccactggataatcgcaaggaatgaaaatgatgca
atactggaggcagaagagaggtacccagcgaagaaatatcagttagatcaagatcctgat
gtgttggatacgtggttttcatcaagccttttcccattatccatattcggttggccagat
gatacagctgaccttagtactttctatcctacttctgtccttgaaactggattggacatc
ctcttcttttgggtagcaaggatggtgatgttgggaatactattgggtggtgatgtgcca
tttcaaaagatttacttgcatccaattattcgtgatgcacatggccgtaagatgtccaag
tcacttggaaatgtcattgatcccattgatgtaataaatggtataacgctagagggtctt
cagaaaaagttggaacagggcaacctggacccagacgagttagaaaaggcaaaagaaggc
ctgaagaaggatttccctgatggtattcctgagtgtggtactgatgcccttcgttttgcc
ctgatatcctacacttctcagtctgacaagataaatcttgatatcaagagagtgcatggc
taccgacaatggtgcaataaactatggaatgcaattcgttttgccatgatcaagcttgga
gatcagtacactcccccaacaactgttgtggtggattctatgccacctgtctgtcgatgg
atactatcagtacttaataaatctgttggcaagaccgtgtcatcattagaagcgtataaa
ttctctgaggcaacatcatctatatactcttggtggcaataccagctttgtgatgtattt
atagaagcaattaaaccttacttcaatgactctcaagagttcgaagctgcaagaggtgct
tctagagatacattatggctatgcctgaacactggtttgcgtctgctccatccattcatg
ccttatgtaactgaagagctttggcagcgccttcctcagcctaaggaggcttgtaggaaa
gattccattatgatatcagaatatccctcaactgtacaggaatgggaaaatgatcaagtt
gagaatgaaatggagattgtgttagatgctgtgagtaagctgagatctctccggccacca
acagatatacatgaaaggcgcccgtcttttgtactctgtcgaaaccaagagattgcagcc
actgttcagtactaccaggctcaaattgcaacgcttgcttccgtgtcatctctgaagatc
ctgataggggatgatccaagtccacctggttgtgccacaaatattgtaaacaaggatcta
gcagtgtatctccagctccggggagctctcaacgcggaagctgaacatgagaagcttagg
aagaggagagaggaagttcaaaagcaacatgacaccttgtcacagaaaatgaatgcttca
ggctaccgtgagaaggcccctcagagcaagcaggatgatgatatgaaaaaacttgcttct
ttattagaggagctcgagatcatcagtgaagctgagagtaaactggatgctaacaactga
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