Lolium rigidum (rigid ryegrass): 124647796
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Entry
124647796 CDS
T09103
Name
(RefSeq) replication factor C subunit 3-like
KO
K10756
replication factor C subunit 3/5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
lrd03410
Base excision repair
lrd03420
Nucleotide excision repair
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124647796
03410 Base excision repair
124647796
03420 Nucleotide excision repair
124647796
03430 Mismatch repair
124647796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124647796
03036 Chromosome and associated proteins [BR:
lrd03036
]
124647796
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124647796
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124647796
DNA Replication Termination Factors
ELG1-RFC complex
124647796
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124647796
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124647796
Check point factors
HRAD17(Rad24)-RFC complex
124647796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
AAA_lid_RFC1
RFC_C
DUF815
Motif
Other DBs
NCBI-GeneID:
124647796
NCBI-ProteinID:
XP_047043626
LinkDB
All DBs
Position
4:171581705..171585136
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AA seq
619 aa
AA seq
DB search
MAIETPAPASPTASPYSSSSPAGRTLSAAFAEDRRRESKIRASNLLPGCGGRSPQHPRAQ
LVSRLLQRWACLPKTHVPVRARAGTPTPPPSHRRPSSASTSTPQSAQVHRRPSSASTSTP
QAAQVHRRPSSASTSTPQAVARQDHAGVPSVPVRRPLREREDAAAIGLVPTPTGSEASAV
STPEVVPGDGSNWRRDTATTVARGANIWVRALRKPSLQVDSPQQSVDSPIAADDMYVWAD
KYRPSVLGEFICNKAVADNLHRMVTERQCSHFIFEGAQAVGKRSMVLALLRDAFGPDELK
IEEQTKRIEMKGEIVKHIDLKVRISDHHVEVNLADSHGYEKYVITTLLNESLPPPDFICT
HANCKVIVVHDADRISSDLQHYIGWFLGRYAGCNKIIFCCSSSKNLEAVEHLCKVITLKP
PSFDEIIKVLEFIATQEGIDLPDGIASRIAASASNNLRQAIRSFEATWTANYSFTKDQPI
LTGWEEEINNVAKKIMEEPSPKQLYLIRGKIRKMIEHNVSPYFIFCHLVTELKRDRDEDF
QNSIDELASDLNRTEQCKEYKSQDTALVKRAINIEGFTVEGPDQGEAIQCFIKIEEFTVR
FMSFYRSLIAKNSIRGGVS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgagacccctgcgcccgcgtccccgaccgcctcgccgtactcctcctcctcc
ccggccggccgcaccctctccgcggccttcgcggaggaccgacgccgcgagtccaagatc
cgcgcctccaacctcctcccgggctgcggcggccgctcgccgcagcacccgcgcgcccag
ctcgtgtccaggctcctccaacgctgggcctgcctccccaagacccacgtccctgtccgc
gcccgcgctggcacccctaccccgccgccctcgcaccgtcggccgtcgtccgcgtcgacg
tcgacgccccagtcggcgcaggtgcaccgtcggccgtcttccgcgtcgacgtcgacgccc
caggcggcgcaggtgcaccgtcggccgtcgtccgcatcgacgtcgacgccccaggcggtg
gcacgccaggaccacgccggcgtgccgagtgtccccgtgaggaggcctttgagggagaga
gaggatgccgccgccatcggccttgtgccgacgccgacggggtccgaagccagtgccgtg
tcgactcccgaagtggttcccggcgatgggagcaactggagacgcgataccgccaccacc
gtcgcgagaggagcaaacatctgggtgagggctttgcgcaagccgtctctgcaggtggat
tccccgcagcagtcggttgattcgccgatcgcggcggacgacatgtacgtatgggcggac
aagtaccggcccagtgtactcggggaattcatctgcaacaaggccgtcgccgacaacctc
caccggatggtgaccgagcgccaatgcagccatttcatatttgaaggggcgcaggcggtc
ggtaagagaagcatggtgctggcccttttaagggatgcctttggtcctgatgaactcaag
atagaggaacaaacaaagagaatcgagatgaagggtgaaattgtcaaacacattgatctc
aaagtaaggatttctgatcatcatgtggaggtaaacttggctgattcacacggctatgag
aagtatgtcataactactttgttgaatgaatcactaccaccaccggactttatttgcact
catgccaactgcaaagtgattgtggtccatgacgctgacaggatttcttctgatcttcaa
cattatatcggttggtttctggggaggtatgcaggctgcaataaaattattttctgctgc
tccagttctaaaaaccttgaggctgtggaacatctatgcaaggttatcacacttaaacca
ccttcatttgatgagataatcaaggttctagagttcattgctacgcaagaaggcatagat
ttgcctgatggaattgctagtagaattgctgcgagcgcgagtaataatctccgacaggca
atacgttcttttgaagctacatggacagcaaactattcattcacaaaagaccagcctatt
ttgactggatgggaggaggaaattaacaatgttgccaaaaaaatcatggaagagccaagt
ccaaagcagctgtatctcattcgagggaagatcagaaaaatgattgaacataatgtgtca
ccttatttcattttctgtcacttggttaccgaactgaaaagggacagggatgaagatttt
cagaatagtattgatgaactggcgtcggatttgaaccgaacagagcagtgcaaagaatac
aaatctcaggacacagctttggtcaaaagagctatcaatatagaaggtttcactgttgag
gggcctgaccaaggggaagccatccaatgcttcataaagattgaagaattcaccgtgagg
ttcatgagcttctacaggtcgttaatagcgaagaattcgatcagaggaggtgtttcttga
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