Lolium rigidum (rigid ryegrass): 124648744
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Entry
124648744 CDS
T09103
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124648744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124648744
04121 Ubiquitin system [BR:
lrd04121
]
124648744
03036 Chromosome and associated proteins [BR:
lrd03036
]
124648744
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124648744
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
124648744
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124648744
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
124648744
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
124648744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
DUF543
Motif
Other DBs
NCBI-GeneID:
124648744
NCBI-ProteinID:
XP_047044413
LinkDB
All DBs
Position
4:complement(267377197..267382096)
Genome browser
AA seq
478 aa
AA seq
DB search
MSSGERLPPPPPPGFGAAVAGRRPPRSDFGGLLSSTPLQFLASGVPVPAGGRVYRTSCRG
RNKNASPANGPYKRVHADATEVASPGVNASTTEQNLRPCKKSKVLGKHGKLDDNEDATEL
KRPPTPINVFEDECVFCHSFRTCEKFHGPMVMYRKGRIVSSNEGNPNNVIYVHQKCMDCQ
CLDKQGMNVVHSREDQQVDQPNTSILSLPQGQCSDKGLCADYRREEKQTTRCRTPVNQWV
LLGSVLSASEKDSLKEFASLTSSNLAEKWDKNVTHVIVGTGASNSCGESYQVLMAILSGK
WVLRAGWIVDCLAEPIPGPKNCWAEPIIVPEISYEVEFYYASHISIDGPKKGRAGAAKGA
PKLFSGLHFCLSTYMNPEIRENIKSLIAAAEGQVLEAMSPRSLQENLEKDPAKVYFIYVG
GPASTTFVGNKKEANEYMASGAQAICHLWLFDAIAAYDVRMLDRSDGFTPDVYANTAC
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagctctggcgagaggctgcccccgcccccgcccccgggcttcggcgccgccgtggcc
ggcaggcgaccgccccggtcagatttcggaggtttgctctcctcgacccccctccagttt
cttgcttccggcgtgccggtgccggccggcggtcgcgtttatcgcaccagttgccgcggc
agaaataaaaatgcgtcacccgctaatggtccatataagagagttcatgctgatgcaacc
gaagttgcatcaccaggtgttaatgcaagtaccactgaacaaaacctgcgtccctgtaaa
aaaagcaaggttttggggaaacatggcaagttggacgacaatgaagatgctactgaattg
aagagaccgccaacaccaatcaatgtatttgaagatgaatgtgttttctgccattctttt
agaacttgtgagaagtttcatggtccaatggtcatgtatcgaaagggaaggattgtgtcc
agcaacgagggcaacccaaacaatgtcatctatgtccatcaaaaatgcatggactgccaa
tgtttagataaacaaggaatgaatgtcgttcatagcagggaagatcagcaagtagatcaa
ccaaacacttcgattctttctttgcctcagggacaatgttcagacaaaggactttgtgcc
gattaccggagagaagaaaaacaaacaacccggtgtagaacccctgtgaaccaatgggtc
ttgctcggttcagtattaagtgcatcagagaaggattccctcaaggaatttgcttccttg
accagttcaaacttggctgagaaatgggacaaaaatgtgactcatgttattgtcggcaca
ggtgctagtaactcatgtggcgaatcatatcaagtcttgatggcaatcttgtctgggaaa
tgggttctcagagctggatggattgtggattgcttggcggagccgattccaggtccaaaa
aattgctgggcagagccgattatagttccggaaatttcttacgaggtggaattttactat
gcttcacacatatcgattgatggaccaaagaaaggacgagctggagcagctaaaggggca
ccgaaactgttctctggactgcatttctgcctcagcacgtacatgaacccagaaattaga
gaaaacataaaaagtctcatagcagccgctgaaggacaggtcctggaggcaatgagcccg
cgttcattacaggagaatctggaaaaagatcccgcaaaggtatacttcatctacgttggt
ggccctgcttcgactacatttgttggcaataagaaagaggcaaatgagtacatggcctcc
ggagcgcaggctatctgccacctttggctgtttgacgctatcgcggcttatgatgttcgg
atgctggatcgcagtgatggcttcaccccagatgtgtatgcgaatactgcttgttag
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