Lolium rigidum (rigid ryegrass): 124648990
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Entry
124648990 CDS
T09103
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124648990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124648990
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124648990
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Paralog
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Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
124648990
NCBI-ProteinID:
XP_047044631
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Position
4:77472346..77475947
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AA seq
403 aa
AA seq
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MEIQTSGKPIDMLMEKVLCMNIISSDYFKELYRMKTYHEVIDEIFYHVDHVEPWMTGNCR
GPSTAFCLLYNFFTMKLTVKQMHGLLKHPDSPYIRAIGFLYLRYVADPKILWTWYEPYLK
DDEEFSPGSNGRMTTIGVYVRDLILGQYYFDSILPRVPVPVIRQVTANLEKMKLPTKLSG
ATGDSSRHGSEDTARRPPSVKASLSVSFGQRAPHRASTRDSSPVRRTVTQDDHRRSSSPF
RRSRSRDSPPNGRSSRDRDADRSSRDREHDRSSRDKDYDRDIRDYDRGSRDRDYHRSRHS
EERRDSRREHDISRHRRSSSRHRSRSRSRSRSRSRSRSRSRNEPRSSPFGDTNKEKAAAA
SNLAKLKDLYGDVTEKKDDGDAKPRHHDSCAEEVIMLGGSRWR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacttcagggaagcccattgatatgctgatggagaaggttctttgtatg
aacatcatctcttctgattacttcaaggagctctacaggatgaagacctatcatgaggtc
atcgacgagatcttctaccatgttgatcatgtggagccttggatgactggcaattgcagg
ggcccctccactgcattttgtctactctacaattttttcacaatgaagcttactgtgaaa
cagatgcatggtttgttgaagcatcctgactccccgtacattagagctataggattcctg
tatcttcgatatgttgcagatccaaagatcctatggacatggtatgagccctacttgaag
gatgatgaggaattctcccccggatctaatggtcgcatgacaaccataggtgtatatgtg
cgtgatcttatacttggacagtactacttcgacagtatccttccaagagttcctgttcca
gtaattcgtcaagtaacagccaatcttgagaagatgaagctgccaactaagctttctggg
gcgactggagactccagtcgtcatggatcagaggatacggcccgtcggcccccttctgtt
aaagcttctttgtcagtttctttcggacagcgtgctccacaccgtgcttctacaagggat
tcgtccccagttcggcgaacagttacccaagatgatcatcgaagatcatcttcaccattt
cgtcgtagtagaagccgggacagccctcccaatggccgttcaagccgtgaccgagatgct
gaccgttcaagccgtgaccgagaacatgatcgttcaagccgcgacaaggattatgatagg
gacatcagagactatgaccgtggcagcagggaccgcgactaccacaggtccaggcattca
gaagaaagacgagatagccgaagggagcatgacattagtagacacaggcgctccagctca
cgtcataggagcagaagcaggagccgcagcaggagccgaagccggagcagaagtagaagc
aggaatgaacctcgatcaagtccatttggggacacaaacaaggagaaggcagctgctgcg
agcaacctagccaaacttaaagacctgtacggtgatgtaaccgagaagaaggatgacggt
gatgccaagccgcggcatcatgattcatgcgccgaggaggttatcatgctgggaggctct
agatggaggtaa
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