Lolium rigidum (rigid ryegrass): 124649040
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Entry
124649040 CDS
T09103
Name
(RefSeq) chaperone protein ClpB1-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124649040
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP100
124649040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_18
AAA_14
nSTAND3
bpMoxR
AAA_7
IstB_IS21
ATPase_2
AAA_28
TniB
DUF815
RuvB_N
TsaE
Zeta_toxin
NACHT
AAA_33
RNA_helicase
AAA_25
NBD_SMAX1
AAA_19
Roc
Mg_chelatase
DNA_pol3_delta2
ABC_tran
ResIII
T2SSE
DUF2987
DUF87
DASH_Spc19
DUF4426
Motif
Other DBs
NCBI-GeneID:
124649040
NCBI-ProteinID:
XP_047044679
LinkDB
All DBs
Position
4:complement(198690180..198693287)
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AA seq
920 aa
AA seq
DB search
MNPDNFTHKTNEALVAAHEAASDAGHAQITPLHLAAALAADKAGILRQAVAQASGGNPSA
GDSFERVLAAALKKLPSQSPPPDSVPASTALIKAIRRAQSAQKKRGDSHLAVDQLLLGLL
EDAQVADCLKEAGVSASRVRDEVEKLRGGGGADGGRKVESASGDSSFQALKTYGRDLVEQ
AGKLDPVIGRDEEIRRVVRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRVVRGDVPSNLL
DVRLVALDMGALVAGAKYRGEFEERLKAVLKEVEEAAGKVILFIDEIHLVLGAGRTEGSM
DAANLFKPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVFVAEPSVADTISILRGL
KEKYEGHHGVRIQDRAIVVAAQLSSRYIMGRHLPDKAIDLVDEACANVRVQLDSQPEEID
NLERKRIQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLTMKYRKEKERIDEIR
KLKQRREELQFTLQEAERRMDLARVADLKYGALQEIDAAIAKLEGETGENLMLTETVGPE
QIAEVVSRWTGIPVTRLGQNDKERLVGMADRLHKRVVGQTEAVNAVAEAVLRSRAGLGRP
QQPTGSFLFLGPTGVGKTELAKALAEQLFDDENLMVRIDMSEYMEQHSVARLIGAPPGYV
GHEEGGQLTEQVRRRPYSVILFDEVEKAHVAVFNTLLQVLDDGRLTDGQGRTVDFRNTVI
IMTSNLGAEHLLAEMLGKNSMKVARELVMQEVRKHFRPELLNRLDEIVIFDPLSHDQLRK
VARLQMKDVAVRLAERGIALAVTDAALDVILSLAYDPVYGARPIRRWIEKRVVTQLSKML
IQEEIDENSTVYIDAAAPPKKDELAYRVDRSGGLVNAETGQRSDILIQVPNGAVSGETAK
AVKKMRIMEEGDEDGMDEDV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggacaacttcacccacaagaccaacgaggcgctggtggcggcgcacgaggcg
gcgtcggacgccggccacgcgcagatcacgccgctgcacctggcggcggcgctggcggcc
gacaaggccgggatcctgcgtcaggccgtcgcgcaggcgtccggcgggaacccgtccgcg
ggggactccttcgagcgcgtgctcgccgccgcgctcaagaagctcccgtcgcagtcgccg
ccgcccgactccgtgccggcgtccacggcgctcatcaaggccatccgccgcgcgcagtcc
gcgcagaagaagcgcggcgactcgcacctcgccgtcgaccagctgctgctgggcctcctc
gaggacgcgcaggtcgccgactgcctcaaggaggccggcgtgtcggcctcgcgggtgcgc
gacgaggtcgagaagctccgcggcggcggcggcgccgacggcgggcgcaaggtggagtcc
gcctccggcgactccagcttccaggcgctcaagacctacggccgcgacctcgtggagcag
gccgggaagctggatcccgtcatcggccgcgacgaggagatccggcgcgtcgtgcgcatc
ctctcgcgccgcacgaagaacaacccggtgctcatcggcgagccgggggtggggaagacg
gccgtggtggagggcctcgcgcagcgcgtggtgcgcggggacgtgcccagcaacctgctc
gacgtccgcctcgtggcgctcgacatgggcgcgctcgtcgccggcgccaagtaccgcggc
gagttcgaggagcggctcaaggccgtgctcaaggaggtggaggaggccgcggggaaggtc
atcctcttcatcgacgagatacacctcgtcctcggcgccgggaggacggaggggtccatg
gacgccgccaacctcttcaagcccatgctggcgcggggccagctccggtgcatcggcgcc
accacgctggaggagtaccgcaagtacgtggagaaggacgcggccttcgagcgccggttc
cagcaggtgttcgtcgcggagccgagcgtggccgacaccatcagcatcctgcgcgggctc
aaggagaagtacgaagggcaccacggggtgcgcatccaggaccgcgccatcgtcgtcgcc
gcgcagctctcgtcgcggtacatcatgggccggcacctgccggacaaggccatcgacctg
gtggacgaggcgtgcgccaacgtgagggtgcagctggacagccagccggaggagatcgac
aacctggagcggaagaggattcagctggaggtggagctgcacgcgctggagaaggagaag
gacaaggccagcaaggcccggctcgtggaggtgaggaaggagctggacgacctccgggac
aagctgcagccgctgacgatgaagtacaggaaggagaaggagaggatcgacgagatccgg
aagctcaagcagcggcgcgaggagctgcagttcacgctgcaggaggccgagcggcgcatg
gacctggcgcgcgtcgcagacctcaagtacggcgcgctccaggagatcgacgccgccatc
gccaagctggagggcgagacaggggagaacctgatgctgacggagaccgtcggccctgag
cagatcgccgaggtggtcagccggtggaccggcatcccggtgacccggctcgggcagaac
gacaaggagcggctggtcggcatggctgacaggctgcacaagagggtggtcgggcagacg
gaggcggtgaacgccgtcgcagaggcggtgctcaggtccagggctgggcttggccggccg
cagcagcccaccgggtccttcctcttcctgggcccgaccggcgtgggcaagaccgagctc
gccaaggccctcgccgagcagctgttcgacgacgagaacctgatggtgcgcatcgacatg
tcggagtacatggagcagcactccgtcgctcgcctcatcggagcaccacctggctatgtt
ggacatgaggagggcgggcaactgacggagcaagtgcggaggaggccgtacagcgtgatc
ctgttcgacgaggtggagaaggcgcacgtcgcggtgttcaacacgctcctccaggtgctc
gacgacggcaggctcaccgacgggcaaggcaggacggtggacttcaggaacaccgtgatc
atcatgacctccaacctcggcgccgagcacctcctggccgagatgctgggcaagaactcc
atgaaggtcgcgcgcgagctcgtcatgcaggaggtgaggaagcacttcaggcctgagctg
ctgaaccggctggacgagatcgtcatcttcgatcccctgtcccatgaccagctgaggaag
gtcgctcgcctgcagatgaaggacgtggccgtccgcctcgccgagaggggcatagccttg
gccgtcaccgacgccgcgctggacgtcatcctgtctctggcctacgatccagtgtatggc
gcgaggccgatcaggaggtggatcgagaagagggtggtgacgcagctgtcgaagatgctg
atccaggaggagatcgacgagaacagcaccgtgtacatcgacgccgccgcgccgcccaag
aaggacgagctggcgtacagggtggaccgcagcggcgggctggtgaacgccgagacgggg
cagaggtcggacatcctcatccaggtgcccaacggcgccgtcagcggcgagacggccaag
gccgtgaagaagatgcggatcatggaggaaggggacgaggacggcatggacgaagacgtc
tga
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