Lolium rigidum (rigid ryegrass): 124649165
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Entry
124649165 CDS
T09103
Name
(RefSeq) SAGA-associated factor 11-like isoform X1
KO
K11363
SAGA-associated factor 11
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124649165
03036 Chromosome and associated proteins [BR:
lrd03036
]
124649165
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
124649165
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
124649165
SLIK complex
124649165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
IATP
K_channel_TID
Motif
Other DBs
NCBI-GeneID:
124649165
NCBI-ProteinID:
XP_047044787
LinkDB
All DBs
Position
4:173450462..173453378
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AA seq
179 aa
AA seq
DB search
MSSSNDAPVSPRSQLALSCFEELLDLAVADVASECHRIARLGLDRSVDAEEEELRAWAAR
AAADHPGAEDGGATRGTGGGGGNKGAPDVFGQTHPAIAADVVDCMNCGRPVVAGRFAPHL
EKCMGKGRKARPKTTRSSTAGRNRSSNVVLQGRSTVTIHSRSPDSSAMLLPCFRCLNSI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctccaacgacgcccccgtcagccctcgatcccagctcgctctgagctgcttc
gaggagctcctcgacctcgcggtggcggacgtcgcgtcggagtgccaccgcatcgcgcgc
ctcggcctggaccgcagcgtcgacgccgaggaggaggagctccgcgcctgggccgcgcgc
gccgccgccgaccaccccggcgccgaggacggaggcgccacccgcgggaccgggggagga
ggggggaacaagggcgcgcccgacgtgttcggccagacgcaccccgccatcgccgccgat
gtcgtcgactgcatgaactgcggccgccccgtcgtcgccggccgcttcgccccgcacctc
gagaagtgcatgggcaagggtcgcaaagctcgtccaaagaccacgaggagcagtacagcc
ggacgaaacagaagtagtaatgtggtgctgcaggggaggagcacagtaaccatacattcc
aggagtcctgacagcagcgctatgctactgccatgttttcggtgcttgaactccatatga
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integrated database retrieval system
