Lolium rigidum (rigid ryegrass): 124649293
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Entry
124649293 CDS
T09103
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124649293
Transcription machinery [BR:
lrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
124649293
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
124649293
NCBI-ProteinID:
XP_047044900
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All DBs
Position
4:complement(210625943..210627893)
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AA seq
485 aa
AA seq
DB search
MTSTVTTPSRPLSAGSQRRRYRPTVLAIAGAGKPRRRRAPAAATSCSALASKQSTAAAKL
LPPAEVEEAAAGISTDYNEVAAALETLYQLSPTLVEDEQLDQSKKATKKKRKVRKKAAAK
TTIPIRKVVVRSQRPRRMDLGKRVEMREAAGKEEVGAERGFEEALLREHAVSTDMGSLDW
RRMKIPPVLTSAQSARLFKIVQPMKAILKVHENLQNELEREPTDVEVAQAMNMPVQRLRR
CREVGRAARNKLIKHNLRLVLYAINKYYPDMTGDERFADLCQAGANGLITAIDRFDPKRG
FRISTYALFWIRHSVVRAMTLSSFTRFPFAMESERQEVNRAREELSFELGRAPTDEETMK
KVGLSPARYRDVVRMTRPTYSLHSRNRVTQEELINEVTDGDAIGVDTHKHNRLLRLAIDD
LLDSLKPKESVVIRQRFGLDGRGRRTLSEIAGNLRISREMVRKYELKALMKLKHPTRVDY
LRRYM
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaccgtgacgacgccgagccgcccactctcggcggggagccagcggcggcgg
tacaggcccacggtgctcgccatcgccggcgccggcaagccgcggcggcgccgcgctccg
gccgccgccaccagctgctcggcgctcgcgtccaagcagagcacggccgcggccaagctc
cttcctcctgcggaggtggaggaggcggcggccgggatcagcacggattacaacgaggtg
gccgccgcgctggagacgctgtaccagctaagcccaaccctagtggaagacgagcagctg
gaccagagcaagaaggccaccaagaagaagaggaaggtgaggaagaaggcggcggccaag
acgacgatcccgataaggaaggtggtggtgaggagccagcggcctcggcggatggattta
gggaagagggtggagatgagggaggccgcgggcaaggaggaggtgggggcggagcgcggg
ttcgaggaggcgctgctgagggagcacgccgtgtccacggacatgggcagcctcgactgg
aggcggatgaagatcccgccggtcctcacctccgcgcagagcgcccggctcttcaagatc
gtgcagcccatgaaggcgattttgaaggtgcacgagaacctgcagaacgaactggagagg
gagccgacggacgtcgaggtcgcccaggccatgaacatgccggtgcagcggctgcggcgg
tgccgcgaggtcggccgggcagccaggaacaagctcatcaagcataacctgcgtctggtg
ctgtacgcgattaacaagtactatccggacatgaccggcgacgagcggttcgccgacctg
tgccaggccggcgccaacgggctcatcacggccatcgaccgcttcgaccccaagcgcggc
ttccgcatctccacctacgcgctcttctggatccgccactccgtcgtccgcgccatgacg
ctctccagcttcacccgcttccccttcgccatggaatcggagaggcaggaggtcaacaga
gcgagggaggaactatccttcgagctcgggagggcgccgacggacgaggagacgatgaag
aaagtggggctgtctccggcgagataccgggacgtggtgcggatgacgagaccgacctac
tcgctccactcgcggaaccgtgtcacgcaggaagaactcattaacgaggtcaccgacggc
gacgccatcggggtcgacacccacaagcacaaccgcctcctccgcctcgccatcgacgac
ctcctggattcgctgaagcccaaggagagcgtggtgatccggcagaggttcgggctggat
ggtagggggaggcgaacactgagcgagatcgccggaaatctgaggatctctagagaaatg
gtgcgcaagtacgagctcaaggcgctcatgaagctcaagcaccccacccgggtcgactac
ctgagaagatacatgtga
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