Lolium rigidum (rigid ryegrass): 124649315
Help
Entry
124649315 CDS
T09103
Name
(RefSeq) geranylgeranyl pyrophosphate synthase 7, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00900
Terpenoid backbone biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124649315
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lrd01006
]
124649315
Enzymes [BR:
lrd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
124649315
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
124649315
2.5.1.29 geranylgeranyl diphosphate synthase
124649315
Prenyltransferases [BR:
lrd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
124649315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
124649315
NCBI-ProteinID:
XP_047044921
LinkDB
All DBs
Position
4:89032244..89033371
Genome browser
AA seq
359 aa
AA seq
DB search
MAKVVPFLVHHVTPSPSLKLHFSPRNASLQFHARHSTTSVRCAVPTPTSNTPITNPTESQ
GEDLFSFDRYMASKAVTVNDALDRALPLVQPEGLSESMRYSLLAGGKRVRPMLAIAACEM
VGGDEAAATPVACAVEMVHTMSLIHDDLPCMDDDDLRRGCPTNHVAFGVSTALLAGDALL
SLSFEHIARGCVEHGVPADRALRAVAELANAVGTGGLAAGEVVDLASEGADVGLATLEYI
HIHKTARLLEAAAVCGAIVGGAGEEDIESIRRYARYVGLLFQVVDDVLDVTQTSEQLGKT
AGKDLATDKATYPKLMGVDGARAYAAELVASAEAELDRFDHARTQPLRHLARFIAYRQN
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggtcgtgccctttctcgtccaccatgtcaccccgtcgcctagtctcaagctc
catttttctccaagaaacgcttccctccaattccatgctaggcattccaccaccagcgta
cggtgcgctgtgccgactccgacgagcaacacccccatcaccaaccccaccgagtcacag
ggtgaggatcttttcagcttcgacaggtacatggcgtccaaggccgtgaccgtgaacgac
gcgctcgaccgcgctctgccgctcgtgcagcccgagggcctcagcgagtccatgcgctac
tcgctcctcgcgggcggcaagcgcgtgcgccccatgctcgcgatcgccgcttgcgagatg
gtgggcggcgacgaggctgccgccacgccggtggcctgcgccgtcgagatggtccacacc
atgtcgctcatccacgacgacctcccgtgcatggacgacgacgacctccggcgcggatgc
cccacgaaccacgtcgccttcggagtcagcaccgcgctcctcgcgggagacgcgctcctg
tccctctcgttcgagcacatcgcccggggctgcgtggagcacggcgtgccggccgaccgc
gcgctccgcgccgtggcggagctcgccaacgccgtgggcacgggtgggctcgctgcgggg
gaggtggtggacctggccagcgagggcgcggacgtcggcctggccacgctggagtacatc
cacatacacaagacggcgcggctcctggaggccgcggcggtgtgcggagccatcgtcggc
ggagccggcgaagaagatatcgagagcatccggcggtacgcgcgttacgtcgggctgctg
ttccaggtggtcgacgacgtgctggacgtgacgcaaacatccgagcagctggggaagacg
gccgggaaggacctggcgaccgacaaggcgacgtacccgaagctgatgggcgtggacggg
gcgcgcgcatacgccgccgagcttgtggcgagcgccgaggcagagctagaccggttcgac
catgcccgcacccagccgctgcgccacctcgcgcgatttattgcctacaggcagaactga
DBGET
integrated database retrieval system
