KEGG   Lolium rigidum (rigid ryegrass): 124649469
Entry
124649469         CDS       T09103                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    124649469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124649469
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     124649469
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_I MutS_IV ATG17_like
Other DBs
NCBI-GeneID: 124649469
NCBI-ProteinID: XP_047045052
LinkDB
Position
4:complement(88884488..88893246)
AA seq 941 aa
MDGDDFLPEGGKLPELKLDARQAQGFISFFKKLPKDPRAIRLFDRRDYYTAHGENATFIA
KAYYHTMTALRQLGSSSDGISSVSVSRAMFETIARNLLLERTDHTLELYEGSGSSWRLAK
SGTPGNIGSFEDILFANNDMQDSPVTVALFPVVRESQLYVGLSFVDMTNRKLGLAEFPED
NRFTNVESALVALGCKECLLPADFDKSIDLQPLQDAISNCSVLLTERKKAEFKSRDLVQD
LGRIIRGSVEPVRDLLSQFDFALGALGALVSYAELLADDTNYGNYTIEKYNLDRYMRLDS
AAVRALNIAEGKTDVNKNFSLFGLMNRTCTAGMGKRLLNSWLKQPLLDVNEINNRLDMVQ
AFAEDPELRQGLRQQLKRISDIDRLTHALRRKSANLQPVVKLYQSCRRISYIKNVLQQYN
GQFSTLVNTRFLSSLEEWLAENRYGKFATLVETAIDLEQVDNGEYRISPLYSSDLAVLKN
ELSDVENKISNLHKHTATDLDLSVDKLKIEKGPFGHVFRISKKDEQKVRKKLTSNYIIIE
TRKDGVKFTSTKLKKLGDQYQALFSEYASCQKTIVDDVVQVSCTFSEVFENFSAIISELD
VLQSFADLATSCPVPYVRPDITTSEEGDIILQGSRHPCLEAQDGVNFIPNDCTLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDQASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGASEKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTKAPALFATH
FHELTALANRNGDQNQHVPDLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAE
FANFPEAVIALAKSKAEELEDFSTAPNLSDERSDEVGSKRKRVFSPDDVTRGAARARLLL
EDFAALPLDEMDGSKAMEMVAKLKSEFEKDAASNPWLQQFL
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggacggcgacgacttcctgccggaggggggcaagctcccggagctcaagctagatgcg
aggcaagcgcagggtttcatctccttcttcaagaagttgcccaaggatcctcgggccatc
cgtctcttcgaccgccgggattattacaccgctcatggtgaaaatgctacgtttattgca
aaggcgtactatcacacaatgaccgccttacgccaactaggcagtagctctgatggaatc
tcaagtgtcagtgtgagcagggctatgtttgaaaccattgcacgcaaccttttgctagag
aggacagaccatacactggagctctatgagggaagtgggtcaagttggaggttagcaaaa
tctggaacacctggaaacattggcagttttgaagatattctgtttgcaaacaatgacatg
caagattctccggttactgttgcattgtttcctgtcgtccgtgaaagtcagctgtatgta
gggcttagttttgtggatatgaccaaccggaagcttgggttggctgagttccctgaagat
aatcgattcacaaatgttgaatcagccctggttgcattaggctgcaaggagtgtcttctt
ccagcagattttgacaaatcaattgatttgcagcctcttcaggatgctattagtaactgc
agtgttctactgaccgaaaggaagaaggctgaatttaaatcaagagatcttgtgcaggat
cttggtagaataatcaggggttctgttgagccagttcgtgacctcctatctcagtttgac
tttgctttgggtgcccttggagctttagtatcatatgctgagttgctagcagatgatact
aactatggaaattacacaattgagaaatacaatttggaccgctacatgcgacttgattct
gccgcggtgcgagcattgaatattgctgaagggaaaactgatgtaaacaagaattttagt
ttgtttggtttgatgaacagaacttgcactgctgggatgggaaagcggttacttaacagc
tggctgaaacaacctttgctagatgtaaacgaaattaataacagattagatatggttcag
gcttttgcagaagacccggagcttcgtcagggtcttaggcaacaacttaaaaggatatct
gatattgaccgcctaacacatgctctccggagaaaatcagccaacctgcagcctgttgtt
aagctctaccagtcctgccgtagaatctcatatatcaagaatgttcttcaacaatacaat
ggacaattttctacattggtaaacacaaggttccttagctctttagaagagtggctggca
gagaatcggtatggcaagtttgctactcttgtcgagacagctattgacctcgagcaagtt
gacaatggcgagtacaggatatctcccctatattcttctgatcttgctgtgctgaagaat
gagctttctgatgttgaaaataaaataagcaacttgcacaagcataccgccactgatcta
gatctttccgttgataagttgaagatagagaaagggccatttggacatgtgttcagaatc
tcaaaaaaagatgagcagaaagtcaggaaaaagcttacgagtaactacattatcatagaa
actcgtaaagatggtgtgaagtttacaagcactaagcttaaaaagctaggtgaccaatac
caggcactgttcagtgaatacgccagttgtcagaaaacgattgtcgatgatgtagtgcaa
gtttcatgcaccttctcagaggtatttgagaatttttctgcaataatatccgagttggat
gttttgcaaagttttgctgatttggcaacaagctgcccagttccttatgtaagaccagac
atcacaacatctgaggaaggagatattattctgcaaggtagtcgacatccttgtctggag
gcccaagatggtgttaactttataccaaatgattgcactttggtgagagggaaaagttgg
tttcagatcatcaccggaccaaacatgggcggaaaatcaacctttatacgacaggttggt
gtaaatatcttgatggcacaagttggttcctttgttccttgtgatcaggcaagcatcagt
gtgagagattgtatttttgctcgtgttggtgctggtgattgccaactccgtggtgtttcc
acctttatgcaagaaatgcttgaaacagcgtccatcttgaaaggtgcatctgagaagtcc
cttataattatcgatgagttgggacgtggaacttccacatatgatggatttggtcttgca
tgggctatctgtgagcatcttgtggaagtgacgaaggcacctgcattatttgctacccat
tttcatgaattaactgcattagcaaatagaaatggtgatcagaaccaacatgttccagat
ttgggaattgcaaattatcatgtgggtgcacatatagacccatcaagtcggaagttgact
atgctttataaggttgaacctggtgcctgtgaccaaagttttggtatccatgttgcggaa
tttgctaattttccagaagctgtcattgctcttgcgaaaagcaaagcagaagagttagaa
gacttctctactgcaccaaacttgagcgatgaacgcagtgatgaggttggatcgaagcgc
aaaagggtgtttagcccagatgatgtgaccaggggagctgctcgggctcggcttctgttg
gaggattttgctgcactgcctctagatgagatggatgggagcaaggccatggagatggtc
gccaaattgaaatccgagttcgagaaagatgcagccagtaatccatggcttcaacagttc
ctctga

DBGET integrated database retrieval system