Lolium rigidum (rigid ryegrass): 124649496
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Entry
124649496 CDS
T09103
Name
(RefSeq) E3 ubiquitin-protein ligase ZNF598-like
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124649496
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124649496
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124649496
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
zf-C2H2_FBX41
Motif
Other DBs
NCBI-GeneID:
124649496
NCBI-ProteinID:
XP_047045074
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All DBs
Position
4:89688578..89694286
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AA seq
859 aa
AA seq
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MDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLQDTLCCICKTDCPSVFVTKAMGD
YTRVISDFSVLPTGAVEGKVGEYWYHEDTKAYCDDADQYNMIRAMCRLSCSVCDNAEDQI
GQGPQAKRRSRFRSIDQLKGHLFHQHRLYMCNLCLEGRKVFICEQKLYTRAQLAQHTKTG
DSEVDGSDEVERAGFTGHPSCEFCRNALYGDNELYTHMLREHYSCHICQKLHPTRYDYFR
NYDDLEMHFRKDHFLCEDEACLAKKFIVFQSDTEIKRHNAMEHGGRMSRSQRNAALQIPT
SFIYQRNEQDQRRGRGRGRNAYHGRPDRDFSLSVRDGSTTADHGLGSRVDSIAGPLQSLS
VSSSSGRTETSQSSANGRVLEQLSFPPLQDQDIPDARMDAFPDETSFPALSEQQSRYALA
LNQSSRGSARLGDESLFPPLPGSSNKGSASTQQGLQSLAKNTLASRLQQRSKGTVKVLNS
ARPRTAENPEIVPNASSSTQTWPTPDQGLVLSGSQVRIGTQSIRENGVMPPASSGSAWNS
GGPNKMKHSVSTPNFVSGGPSVQPSSSTAYGNKNQLPQQSSQTLPVVEDVRQANKSLVER
MRAALGMDEDRFSAFKEIASEYRQGVIDTSEYLSYVEQFGISHLVPEMARLLPDPRKQKE
LADAYYTNMRFKSFQENASGETIITLKENKRKNKGKGKTPDTETVPAKDVSELLADSFMD
TVRKLQSDKMAQEGEAAVLSKDDYRSSKGRIPLAGGSSSGNMSLDGDPGAISKVSGASRD
VSMGGGSSSSNNSKQSKKTSKFLRARLGDNSLATLDFSRPDMSPERPERESQGQHTGVPV
RGVWKNGAAQKLFSSNGRK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacgatagctgcgcggtgtgcgccgacgcgcttgaatgggtggcctacgggccatgc
ggccaccgcgaggtctgctcaacctgcgtcgtccgcctccgcttcgtcctccaggacacc
ctctgctgcatctgcaagacggattgcccctccgtattcgtcaccaaggcaatgggagat
tacaccagggtgatctccgatttctctgttttgcccactggggcagttgaaggaaaggtg
ggggagtactggtaccatgaggatacaaaggcatactgtgatgatgctgatcagtataat
atgataagggccatgtgccggctttcttgtagtgtatgtgacaatgctgaggatcagatt
ggtcagggaccgcaagcaaagcgcagaagcaggttcaggagcattgatcagcttaaagga
catttgttccatcagcacaggttatatatgtgcaatctttgcttggaggggagaaaggta
ttcatctgtgagcagaagctttatacaagggcacagttagctcagcatacaaaaacaggt
gactccgaggtggatggctctgatgaggttgaacgcgcaggttttacaggacacccaagt
tgtgagttttgcagaaatgcgttgtatggagataatgagctttacacacatatgttgaga
gaacactattcgtgccacatatgtcaaaagctgcatcctacacggtatgattacttccgg
aactacgatgatttagagatgcattttcgtaaagatcatttcctctgtgaagatgaggca
tgtctggcgaagaagttcattgtcttccagagtgacacagagatcaagaggcataatgct
atggagcatggtgggcgaatgtctcgttctcagagaaatgctgcacttcagatacctacc
agttttatataccaaagaaatgagcaagatcaaaggcgtggcaggggtaggggtcgtaat
gcttaccatggcagacctgacagggatttctcattgtctgtgcgggatggcagtacaact
gcagaccatggccttggaagtcgagttgatagtattgcagggcctttgcagtcattaagt
gtcagttctagttcggggcggacagaaactagccaaagctcagcgaatggccgtgtgctt
gaacagttgtcttttcctcctcttcaagaccaggatattcctgatgctaggatggacgct
tttcctgatgaaacctcgtttcctgccctttcagagcagcaatcaaggtatgcgctggct
cttaatcagagctcaaggggttccgccaggcttggtgatgaatcgttattccctcctttg
cctgggtcaagtaacaaaggttctgcttcgacacaacaggggctgcaaagtcttgctaag
aacacacttgcatcaaggcttcaacaacgtagtaagggcactgtgaaggtactcaattct
gctcggcctcgaacagctgagaatcccgaaatagtacctaatgcttcaagttccacccag
acctggcctacacctgatcaggggctagtcctctctggttctcaagttcggattggaact
caatcaataagagaaaatggggtcatgccacctgcgtccagcggctcagcatggaattcc
ggaggtccaaacaagatgaagcactctgtctctactcctaattttgtttctggtgggccc
tctgtccagccatcatcaagtacagcttatggcaataaaaaccaactgccacaacaaagc
agccaaactttgcctgttgtggaggatgttcggcaagccaataaatccctggttgaaaga
atgcgtgctgctttaggaatggatgaggataggttctctgcgtttaaagaaattgctagt
gaataccgtcaaggcgtcattgatacctcagagtatctctcgtatgtggagcaatttggt
atatcacatcttgttcctgaaatggctaggttgctgcctgaccctcggaagcagaaagaa
cttgctgatgcttactacaccaatatgcgctttaaaagcttccaagaaaatgccagtggt
gaaaccattattaccttgaaagagaacaagcgtaaaaataaggggaagggaaaaactcct
gatacagaaacagttcctgctaaggatgtaagtgaattgctagctgatagctttatggac
actgtaaggaagcttcagtcagacaagatggctcaggaaggtgaggctgcggtactttca
aaggacgattatcgatcttccaagggaaggatcccactagctggggggtcatcatctggt
aatatgagtctagacggtgatcctggtgccatttcaaaggtgtctggagccagcagagat
gtgagcatgggaggagggagcagcagcagcaacaacagtaaacaatcgaagaagacgtca
aagtttctcagagctcgattaggtgataattctctggctacgcttgattttagtcgtcct
gatatgagccccgagcgaccagaaagggagtcacaaggccaacacactggtgtgcctgtg
cgaggtgtttggaagaatggtgcagcacagaagctgttttctagcaatggaaggaagtaa
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