Lolium rigidum (rigid ryegrass): 124649570
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Entry
124649570 CDS
T09103
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00900
Terpenoid backbone biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124649570
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lrd01006
]
124649570
Enzymes [BR:
lrd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
124649570
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
124649570
2.5.1.29 geranylgeranyl diphosphate synthase
124649570
Prenyltransferases [BR:
lrd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
124649570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
124649570
NCBI-ProteinID:
XP_047045131
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All DBs
Position
4:complement(89071790..89072689)
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AA seq
289 aa
AA seq
DB search
MACKAVTVNDALDRALPLVQPERLSESMRYSLLAGGKRVRPMLAIAACEMVGGDEAAATP
VACAVEMVHTMSLIHDDLPCMDDDDLRRGCPTNHVAFGVSTALLAGDALLSLSFEHIARG
CAEHGVPADRALRAVAELAKAVGTGGLAAGQVVDLASEGADVGLATLEYIHIHKTARLLE
AAAVCGAIVGGACEEDIESIRRYARYVGLLFQVVDDVLDVTQTSEQLGKTAGKDLATDKT
TYPKLMGVDGARAYAAELVASAEAELDRFDRARTEPLRHLAHFIAYRQN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcaaggccgtgaccgtgaacgacgcgctcgaccgcgctctgccgctcgtacag
cccgagcgcctcagcgagtccatgcgctactcgctcctcgcgggcggcaagcgcgtgcgc
cccatgctcgcgatcgctgcctgcgagatggtgggcggcgacgaggccgccgccacgccg
gtggcctgcgccgtcgagatggtccacaccatgtcgctcatccacgacgacctcccgtgc
atggacgatgacgacctccggcgcggctgcccgacgaaccacgtcgccttcggcgtcagc
accgcgctcctcgcgggagacgcgctcctgtccctctcgttcgagcacatcgcccggggc
tgcgcggagcacggcgtgccggccgaccgcgcgctccgcgccgtggcggagctcgccaaa
gccgtgggcacgggtgggctcgcggcggggcaggtcgtggacctcgccagcgaaggcgcg
gacgtcggcctggccacgctggagtacattcacatacacaagacggcacggctcctggag
gccgcggcggtgtgcggagccatcgtcggcggagcttgcgaagaagatatcgagagcatc
cggcggtacgcgcgttacgtcgggctgctgttccaggtcgtagacgacgtgctggacgtg
acgcaaacgtccgagcaactggggaagacggccgggaaggacctggcgaccgacaagacg
acgtacccgaagctgatgggcgtggacggggcgcgcgcctacgccgccgagcttgtggcg
agcgccgaggcagagctagaccggttcgatcgtgcccgcacagagccgctgcgccacctc
gcgcacttcattgcgtacaggcagaactga
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