Lolium rigidum (rigid ryegrass): 124649717
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Entry
124649717 CDS
T09103
Name
(RefSeq) vesicle transport v-SNARE 13-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124649717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124649717
Membrane trafficking [BR:
lrd04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
124649717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF3792
FUSC
DUF5798
Prominin
Exonuc_VII_L
Cauli_AT
Motif
Other DBs
NCBI-GeneID:
124649717
NCBI-ProteinID:
XP_047045257
LinkDB
All DBs
Position
4:228884448..228887849
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AA seq
221 aa
AA seq
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MSEVFEGYERQYCEISASLSRKCAAASALDGEKKKQKLSEIQADVQESESLIRKMDLEAR
SLQPSVKAGLLAKLREYKSDLSSVKSEVKRVSAPNAHQATREELLEAGMSDTLAASSDQR
GRLMMTSERLNQSSERIRESQRTVFETEEIGVSILQDLHNQRQSLLHAHTTLHGVDDYIG
KSKKILASMSKRMDRNKWIVGGIIAALVFAILFILYFKFAR
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtgttcgagggctacgagcggcagtactgcgagatctccgcctccctctcc
cgcaagtgcgccgccgcctccgctctcgatggcgagaagaagaagcagaagctgtccgag
atccaggccgacgtgcaggagtccgagtcgctgatcaggaagatggacttggaggcgcgg
agcctgcagccgagcgtcaaggcggggctgctggccaaactcagggagtacaagtctgat
ctcagcagcgtcaagagcgaggtcaagcgggtttcggcgcccaacgcccaccaggccacc
agggaggagctcctcgaggccggcatgtccgacacgctcgcggcgtcgtccgatcagaga
ggaagactgatgatgacatccgaaagattgaaccagtcttcagaaagaattagagagagc
caaagaacagtattcgagacagaagaaattggcgtgtcaattctccaggaccttcataat
caacggcagtcactgctgcatgctcacacaacattgcatggcgtggatgactacatcggc
aaaagcaagaagatcctggcgtccatgtccaagaggatggacaggaacaagtggatcgtc
ggtggcatcatcgcagcgcttgtctttgccatcctcttcatactgtacttcaagttcgct
cgttag
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