Lolium rigidum (rigid ryegrass): 124649726
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Entry
124649726 CDS
T09103
Name
(RefSeq) chaperonin CPN60-like 2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124649726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124649726
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124649726
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124649726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124649726
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124649726
Messenger RNA biogenesis [BR:
lrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124649726
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP60 / Chaperonin
124649726
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124649726
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124649726
Exosomal proteins of other body fluids (saliva and urine)
124649726
Exosomal proteins of breast cancer cells
124649726
Exosomal proteins of colorectal cancer cells
124649726
Exosomal proteins of bladder cancer cells
124649726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5570
Motif
Other DBs
NCBI-GeneID:
124649726
NCBI-ProteinID:
XP_047045267
LinkDB
All DBs
Position
4:229244794..229249545
Genome browser
AA seq
585 aa
AA seq
DB search
MYRAAAAAISRSSSSSALRRQLARGAGGGGGGGGEQRQWARGYAAKEITFGADARAAMLR
GVNDLADAVKVTMGPKGRNVIIERPNRSPKVTKDGVTVAKSIEFKDSAKNVGANLVKQVA
DATNKVAGDGTTCATVLTQAILTEGCKAVAAGVNVMDLRKGMNKAIDAVIAHLKSKAWMI
DSPEEINQVATISANGEKEIGDLISKAMGIVGKDGVITIVDGKTLDNELEAVQGMKLSRG
YISPYFVTDQKTQKCEMENPLILIHDKKIANMNSLLPVLQISIQKKKPLLIFADVEGEAL
SMLVLNKHRAGLKICAVKAPGFGENRKANLDDLAVLTGGQVVSEDQGLDLSKVELQMLGT
AKKVTISLDDTIILDGGGDKLQIEERCQQLRESFEDSTAVFDKEKAQERLAKLSGGVAVL
KIGGASEAEVGEKKDRVTDALNAARAAVKEGIVPGGGVALLYATKELDKISTSHEDEKIG
VQIIKNALKAPLMTIAANAGVDGSVVVGKLLEQDNLSLGYDAAKAEYVDMIKAGIIDPVK
VIRTALQDAASVSLLMVTTEAAVAELPATTARIASRMPDMSGMGF
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgggcggcggcggcggccatttccaggtcctcctcctcctcggcgctgcggagg
cagctcgcccgcggggccggcggcggcggcggcggcgggggcgagcagcggcagtgggcg
cgcgggtacgcggcgaaggagatcaccttcggcgccgacgcccgcgccgccatgctgcgg
ggcgtcaacgacctcgcggacgccgtcaaggtcaccatggggcccaaggggcgcaatgtg
attatcgagagaccgaacagatctcccaaggtcaccaaggacggggtcaccgtcgccaag
agcatagagttcaaggacagcgccaagaacgtcggggccaacctggtgaagcaggtcgct
gatgccactaacaaggtcgctggagatggtaccacttgcgccactgtgcttacacaggct
attctcacggaagggtgcaaagctgtggcagctggagtcaatgttatggacttgcgtaaa
ggtatgaacaaggccatagatgctgtcattgctcacctcaaaagtaaagcatggatgatt
gattccccagaggaaataaaccaggtagctaccatttctgcaaatggtgaaaaggaaatt
ggagatctgatatcaaaagcgatggggatagttggaaaggatggagtcattaccattgtt
gatggcaaaactttggacaacgagttggaagcagtacagggaatgaagctgtcaagaggt
tacatatctccttactttgtgactgatcagaagactcagaaatgtgagatggaaaatcct
ctgatccttattcatgacaagaaaattgcaaacatgaattcacttcttccagtattgcaa
atttccatccagaaaaagaaacctcttctcatttttgctgatgtagagggagaagctcta
tcaatgcttgtactgaacaagcatcgtgctggactaaagatatgtgctgtcaaagctcct
ggatttggtgaaaacagaaaggccaacctggatgatttggctgttttgacaggagggcag
gttgttagtgaggaccaaggtcttgatctcagtaaagtggaattacagatgctaggcaca
gctaagaaggttaccatatctcttgatgatactatcattctagatggtggaggtgacaag
ctacagatagaagagaggtgtcaacagcttagagaatcatttgaggacagcaccgctgtg
tttgacaaagaaaaggctcaagagcgtttagcaaagttatctggaggtgttgctgtcctc
aagattggtggagctagtgaagctgaagttggtgagaaaaaagatagggtaacagatgct
ctaaatgctgcaagagctgctgtgaaggagggtattgttccaggtggtggagttgccctt
ttatatgccaccaaggagcttgacaagattagcacatcacatgaggatgaaaagattgga
gttcaaataatcaagaatgctttgaaggcccccttgatgaccatagctgcaaatgctggc
gttgatggttctgtagttgttgggaagctactggaacaagataaccttagcttgggatat
gatgcagcgaaagcggagtatgttgacatgatcaaggctggtatcattgaccctgtaaaa
gtgatccgaactgcacttcaagatgcagcaagcgtttctctgttgatggtaaccactgag
gctgcagttgctgagctgcctgcgacaacagccagaatcgccagtcgtatgccagatatg
agcggaatgggtttctga
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